Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0864 |
Symbol | |
ID | 4035300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1022217 |
End bp | 1022978 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637973327 |
Product | short chain dehydrogenase |
Protein accession | YP_580129 |
Protein GI | 93005692 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATT TATTTGATTT AACGGGTAAG ATTGCTTTGG TCACAGGTGC TAGTCGTGGT ATTGGCGAAT CTATTGCACG CTTATTAGCT TCTAGAGGCG CGCACGTCAT TGTCTCTAGC CGCAAGATTG ATGCTTGCCA AGCAGTGGCA GATAGCATCG TCGCTGATGG ACATAAAGCC AGTGCTTTTG CCTGTCACGT GGGTGAGATG GATCAGATTG ATGCTATTTT TGAGCATATC AAAAGCGAAT TTGGTCAAAT TGATATCTTG GTCAATAATG CCGCTGCCAA CCCTTACTAC GGGCATATCT TAGATACCGA TTTAGCCGCT TTTGATAAAA CTGTCGAAGT CAATATTCGT GGTTATTTCT TTATGTCGAC AGCTGCTGGT AAGATGATGC GCGAGCAGGG CGGCGGGGTT ATCTTAAATA CCGCTTCGGT CAATGGCTTA GTCGCAGGTG ACAAGCAAGG CATCTATTCA ATCACTAAAG CTGCTGTGAT TAGCATGACT AAAGCGTTTG CAAAAGAGTG TGGCCCATTG AACATTCGTG TCAACGCGTT GTTGCCTGGT TTAACCGATA CTAAGTTTGC CTCAGCGTTA ACGACTAATG ATAAAGTCTT AAAAATGGCG CTACATGCAA TTCCATTAGG ACGCGTAGCA GATCCAGATG AGATGGCTGG CACGGTATTA TATCTAGTGT CTGATGCGTC AAGTTATACG ACGGGCGCAA CGATTGTTGT CGATGGCGGG ATGTTGGCTT AG
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Protein sequence | MKDLFDLTGK IALVTGASRG IGESIARLLA SRGAHVIVSS RKIDACQAVA DSIVADGHKA SAFACHVGEM DQIDAIFEHI KSEFGQIDIL VNNAAANPYY GHILDTDLAA FDKTVEVNIR GYFFMSTAAG KMMREQGGGV ILNTASVNGL VAGDKQGIYS ITKAAVISMT KAFAKECGPL NIRVNALLPG LTDTKFASAL TTNDKVLKMA LHAIPLGRVA DPDEMAGTVL YLVSDASSYT TGATIVVDGG MLA
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