Gene Pcryo_0864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0864 
Symbol 
ID4035300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1022217 
End bp1022978 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content45% 
IMG OID637973327 
Productshort chain dehydrogenase 
Protein accessionYP_580129 
Protein GI93005692 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATT TATTTGATTT AACGGGTAAG ATTGCTTTGG TCACAGGTGC TAGTCGTGGT 
ATTGGCGAAT CTATTGCACG CTTATTAGCT TCTAGAGGCG CGCACGTCAT TGTCTCTAGC
CGCAAGATTG ATGCTTGCCA AGCAGTGGCA GATAGCATCG TCGCTGATGG ACATAAAGCC
AGTGCTTTTG CCTGTCACGT GGGTGAGATG GATCAGATTG ATGCTATTTT TGAGCATATC
AAAAGCGAAT TTGGTCAAAT TGATATCTTG GTCAATAATG CCGCTGCCAA CCCTTACTAC
GGGCATATCT TAGATACCGA TTTAGCCGCT TTTGATAAAA CTGTCGAAGT CAATATTCGT
GGTTATTTCT TTATGTCGAC AGCTGCTGGT AAGATGATGC GCGAGCAGGG CGGCGGGGTT
ATCTTAAATA CCGCTTCGGT CAATGGCTTA GTCGCAGGTG ACAAGCAAGG CATCTATTCA
ATCACTAAAG CTGCTGTGAT TAGCATGACT AAAGCGTTTG CAAAAGAGTG TGGCCCATTG
AACATTCGTG TCAACGCGTT GTTGCCTGGT TTAACCGATA CTAAGTTTGC CTCAGCGTTA
ACGACTAATG ATAAAGTCTT AAAAATGGCG CTACATGCAA TTCCATTAGG ACGCGTAGCA
GATCCAGATG AGATGGCTGG CACGGTATTA TATCTAGTGT CTGATGCGTC AAGTTATACG
ACGGGCGCAA CGATTGTTGT CGATGGCGGG ATGTTGGCTT AG
 
Protein sequence
MKDLFDLTGK IALVTGASRG IGESIARLLA SRGAHVIVSS RKIDACQAVA DSIVADGHKA 
SAFACHVGEM DQIDAIFEHI KSEFGQIDIL VNNAAANPYY GHILDTDLAA FDKTVEVNIR
GYFFMSTAAG KMMREQGGGV ILNTASVNGL VAGDKQGIYS ITKAAVISMT KAFAKECGPL
NIRVNALLPG LTDTKFASAL TTNDKVLKMA LHAIPLGRVA DPDEMAGTVL YLVSDASSYT
TGATIVVDGG MLA