| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0815 |
|---|
| Symbol | |
|---|
| ID | 4034902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 962420 |
|---|
| End bp | 963604 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637973280 |
|---|
| Product | glutaryl-CoA dehydrogenase |
|---|
| Protein accession | YP_580082 |
|---|
| Protein GI | 93005645 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.991169 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTT CTAGCAGCCC ACGTTTTGAT TGGGAAGATC CATTTTTATT ACGTGACCAG
CTTACAGATG AAGAGCGCAT GGTAACGGAC AGTGCGCGTC AGTTTTTTCA AAAAGAGCTG
ATGCCGGGTA TCATTCAGGC CAATCGTAAT GAACATTTTG ACCGCGATAT CATGCGTCAG
ATGGGCGAGA TGGGTCTTCT TGGTGTGACG ATCGACGGTT ATGGTTGTGC TGGCATGTCA
AGCGTGGCTT ATGGTTTGAT TGCGAAAGAA GTGGAAGCGG TGGATTCGGG CTATCGTTCA
GCGATGAGCG TGCAGTCAAG CTTGGTCATG CATCCGATAC ATGCCTATGG TACAGAAGAG
CAGAAAGAAA AATATCTGCC AAAACTGGCA ACTGGGGAAT ATGTCGGCTG CTTTGGTCTT
ACAGAGCCGG ATTCGGGTTC AGATCCTTCA TCAATGTCAA CGCGCGCGCG CGCAGTGGCA
GGCGGTTATG AGCTGACTGG TAATAAAATG TGGATTACCA ATAGCCCGAT TTCTGATGTA
TTTGTCGTTT GGGCAAAAGA TGATGCCGGT GACATTTGTG GTTTTATCTT AGATAAAGGT
ATGAAAGGGC TGTCCGCACC GAAAATCGAA GGCAAGTTCT CATTGCGTGC GTCTGTCACG
GGTGAGATTG TCATGGACAA AGTGTTTGTC CCTGAAGCCA ATGCTTTCCC AGATATTCGT
GGTCTAAAAG GTCCGTTTGG TTGCCTAAAT AAAGCCCGTT ATGGTATCGC TTGGGGTTCA
ATGGGTGCGG CTGAATTCTG CTGGAAAGCG GCTCGTCAGT ACACCCTTGA CCGTAAGCAG
TTTGGTCGTC CGCTAGCCGC GACACAGTTG GTACAGCTAA AACTTGCCAA TATGCAAACG
GAAATCACAC TAGGTCTACA AGCAGCATTG CGTGTTGGCC GTTTGATGGA TGAGGACAAT
GCGGCGCCTG AAATGATTTC ACTGATTAAG CGTAATAACT GCGGCAAAGC GCTAGAGATT
GCCCGTATTG CCCGTGATAT GCATGGCGGC AATGGTATCT CTGATGAGTT TCATATTATT
CGTCATGTGA TGAATTTAGA AGCGGTCAAT ACTTATGAAG GTACCCATGA TATTCATGCG
CTCATCTTAG GTCGCGCGCA GACTGGGATT CAGGCATTTT ATTAA
|
|---|
| Protein sequence | MATSSSPRFD WEDPFLLRDQ LTDEERMVTD SARQFFQKEL MPGIIQANRN EHFDRDIMRQ
MGEMGLLGVT IDGYGCAGMS SVAYGLIAKE VEAVDSGYRS AMSVQSSLVM HPIHAYGTEE
QKEKYLPKLA TGEYVGCFGL TEPDSGSDPS SMSTRARAVA GGYELTGNKM WITNSPISDV
FVVWAKDDAG DICGFILDKG MKGLSAPKIE GKFSLRASVT GEIVMDKVFV PEANAFPDIR
GLKGPFGCLN KARYGIAWGS MGAAEFCWKA ARQYTLDRKQ FGRPLAATQL VQLKLANMQT
EITLGLQAAL RVGRLMDEDN AAPEMISLIK RNNCGKALEI ARIARDMHGG NGISDEFHII
RHVMNLEAVN TYEGTHDIHA LILGRAQTGI QAFY
|
|---|
| |