Gene Pcryo_0795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0795 
Symbol 
ID4033740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp936167 
End bp937132 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content46% 
IMG OID637973260 
ProducttRNA-dihydrouridine synthase A 
Protein accessionYP_580062 
Protein GI93005625 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00742] tRNA dihydrouridine synthase A 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATA TGACCAATAA ACGTCTTTCC GTTGCACCCA TGATCGATTG GACAACGACG 
GATTATCGTT ATTTTGCCCG TCTTTTTAAT CCGCATGTTT ATTTGTACAC CGAGATGATC
AGTACGGGCG CGCTGATACA TGGCAATCGT GCACGGCATT TACGCTTTGA TACTCTTGAA
CATCCGCTAG TACTGCAACT TGGCGGCGCA GATATCACTG AGATGACGCA GTGTGCAGAA
TTTGCTCAGC AGCATGGTTA TGATGAGGTT AATATTAATG TGGGCTGCCC CTCTGATCGT
GTACAGCACA ATAAAATCGG TGCTTGCTTG ATGGCAGAAC CCAATACCGT TGCAGACTTG
GTCAAGCATA TGCAAGCGGC AGTCGATATT CCAGTCACGG TCAAGCATCG TATTGGCATT
GATGACTTTG ACAGTTATGA ATTTATGGCG GATTTTGTAC AAAAGGTAGC AGCAGGTGGT
TGTACACGTT TTATCGTTCA TGCGCGTACG GCATGGCTAC AAGGCTTGAG CCCAAAGCAA
AATCGTGAGA TACCGCCACT GCGTTATGAA GATGTGTATC GTTTAAAACA GGACTTTCCT
ACCCTTGATA TTGAGATTAA TGGTGGGATT GAGACCGTCG CTGATATTGA GGCACACCTT
GAGCATATCG ATGGCGTTAT GATTGGGCGC GCCTTTTATC ATAACCCGTA TTTGTTAGCC
GAAGCCAATA GCTTGTGGGA CACCCCTGTC CCGAAGCGTT CAGTTATACT AGCTCAGCTG
TATCCTTATT TAGAAGAGCA AATAGCTAAA GGTGAAGCAC TTCCAACGAT GACTCGGCAC
TATTTAGGGT TATTCCAAGG ATTAGTGGGT GCTCGAAAAT GGCGTCAAGC ATTGAGCGGT
AAGCCTCAAT TGACCATCGA TGATATCAAG CACGCGGCGA CTGAAGTATT AGCCCTTAAC
CCTTAA
 
Protein sequence
MVDMTNKRLS VAPMIDWTTT DYRYFARLFN PHVYLYTEMI STGALIHGNR ARHLRFDTLE 
HPLVLQLGGA DITEMTQCAE FAQQHGYDEV NINVGCPSDR VQHNKIGACL MAEPNTVADL
VKHMQAAVDI PVTVKHRIGI DDFDSYEFMA DFVQKVAAGG CTRFIVHART AWLQGLSPKQ
NREIPPLRYE DVYRLKQDFP TLDIEINGGI ETVADIEAHL EHIDGVMIGR AFYHNPYLLA
EANSLWDTPV PKRSVILAQL YPYLEEQIAK GEALPTMTRH YLGLFQGLVG ARKWRQALSG
KPQLTIDDIK HAATEVLALN P