Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0702 |
Symbol | |
ID | 4034159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 831752 |
End bp | 832468 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637973166 |
Product | two component heavy metal response transcriptional regulator |
Protein accession | YP_579969 |
Protein GI | 93005532 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.149482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAC TGTTAGTAGA AGATGAGCAA AAACTTGGAG AATATATTAA AAAAGGCTTA ACTGAGGCCG GCTTCATCGT GGATCATTAT ATGACTGGTC TAGATGGCTA TCATGCGCTA ATGACTGAAG AATTTAGTGT GGTGCTGATG GATGTGATGC TACCTGACGT CAGTGGCTTT GAGCTGATAC AGCGCTACCG TGCTGCTGAA AAGCATACGC CTGTTTTATT TTTAACCGCT AAAGATGATT TAAGCGATCG AATCAAAGGT ATTGAAATTG GTGGCGATGA TTATCTGACC AAGCCTTTTG CTTTTGCTGA GCTGATTGTT AGAATAAAAA GCCTGTTACG CCGTGCCAAC CAATCGGACT ATAAAAGCAC GGTCATACAT ACCGCTGATC TGAAAATGGA TATTGCCAAA CGCACTGTAT ATAGAGGCGA CACCCTTATC AAACTGACTG CCAAAGAGTT TGCTTTATTA CAGTTTTTCC TAGAACGTCA AGGTGAAGTA CTGCCACGTA CTGTGATTGC CTCGCAAGTA TGGGATATAA ATTTTGACAG CGATACCAAT GTCATTGACG TAGCTATCAG ACGTCTGCGA ATCAAAATCG ACGATGGTTT TGACACCAAG CTGATTCACA CAGTACGCGG TATGGGCTAC AGGTTAGAGC CGCTGGCTGT AGGCGTGGGC GACGATGACA AAGATGATCC AAAATAA
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Protein sequence | MKVLLVEDEQ KLGEYIKKGL TEAGFIVDHY MTGLDGYHAL MTEEFSVVLM DVMLPDVSGF ELIQRYRAAE KHTPVLFLTA KDDLSDRIKG IEIGGDDYLT KPFAFAELIV RIKSLLRRAN QSDYKSTVIH TADLKMDIAK RTVYRGDTLI KLTAKEFALL QFFLERQGEV LPRTVIASQV WDINFDSDTN VIDVAIRRLR IKIDDGFDTK LIHTVRGMGY RLEPLAVGVG DDDKDDPK
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