| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0676 |
|---|
| Symbol | |
|---|
| ID | 4034369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 802070 |
|---|
| End bp | 803800 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637973138 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_579943 |
|---|
| Protein GI | 93005506 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.268239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCTG CCAAATCTGC CTCCAAGCTT ATCGCTGTTA TTACTGACTA TCTAGAGCAA
GATGATATTT TGCCTGTGCC GCAGTTACGC AAACTGGGGA TGATTTATAG CAGTTATCGC
TTTATCGTCA GCTTGTTTTT TATGCTGATG GTATATATTA CGGTTCGCAC GGATGGCAGC
CCATCATTGC CAAGTTTCTT GCAGCAAACC GTGCTCAGTT TTTACGTTTT GCTGAGTTTA
ATCTTGCTAG GATTATTTTA TACCGTTGGT AAGCATATGC GCCGACAGCT GGCTTTTGGG
TTGGCGCTAG ATGTCATTAT CCTAAGCTTA CTGCTCTATA CCGCTGGCGC ACCTGATTTG
CAGCTGACCA TGCTATACAT GGTGGTGGTA GCAGCAAGCT TTATGTTATT ACATGGCTCA
CAAGCATTAA TTATTACTTT GCTTGCCATT ATTTTTGTGA TTTATCAGCA GTTTTTTTAT
GCCATTGCCA ATAGTATGAG TTTGGCAAAT TTAGGCAGTG CCCTACTCAT GTCAGCCAGC
TTTTTGGCAG TAGGCGGTCT AAGCTGGTCG ATATCGCAGC GCTTGGTACA GCTTGAAAAA
GTGGCGGTTC GCCATGCCAA AGAAGTCGAG CGTTTAAATA GTATCAATCA AGAAGTCATC
TCTCAAATGG TCAATGGTGT CATCGTCATT GATGACAAAC AAGTGGTCTT AGCCAACCTT
GCGGCTTATC AGCTACTTAG CATCCCAAGC CGTCATGACA ATCAGTCAAA ACCAGTAGCC
GCTTTTGAGC AGCAACTTGG CCAACAACAT CTGCAATTGT TTAATGCTTG CTTATCGGTA
GCCGCAGGAC TAACGCGTAC TTTTATTTAT GAGCTGCCTG CTGTTGCCAA CTCTTCTATC
ATTGGCAAGC TACGTGTCGA TATTATTCCG TTAAAAGACG ACAGTAAACT CATTATATTA
GAGGATTTAC GCCGTGAACA AGCCAGTGCG CAACAATTAA AGCTCGCCTC ACTTGGACAG
TTGACCGCCA GTATCGCTCA TGAAATCAGA AACCCTTTGG CAGCTATTTC GCAAGCTAGC
CAGTTGCTAA TAGAAGATGT TATAGAAAGC GAGATGGACA ATGACAATGC CCTAAGTCCT
TTCGCTAATA ATGATATAAA TAGCCAGATG ACTGGCAACC ATGAGCTTTA TAAAATGATA
TTTTCGCAAA CAAAACGCGT TAATCGCATT ATCGAAGACG TATTAAAACT GTCGCGCCAG
CAAACGGCCA ATCAACAAAC CATTATCCTT GCTGATTGGA TGCCTGTATT TTTAGACAAT
TACTTTAAAG GACATGATGT CTTTCTACAT GTTCTTACCC AGCCTACCAT CTCTTTTGAT
ATTCATCAGT TAGAGCAGGT ACTCATCAAT TTAATCAATA ATGGTTTACG CTATAGTAGT
TACGCCCACC CTCATGCCTT TGTGGAAATC GAAATTTATT GTGCCGATAA CGATGTTATA
ATCGATGTTT TGGATGGCGG TACTGGTGTT AATGCAGATG ATTTAAGCGC TTTATTTAAT
CCGTTTTTTA CCACCGAACA ATCAGGCACA GGGCTTGGGC TATATTTATC ACAAGCCTTT
TGTGAAGCCA ATCAGGCACG CTTACTGTAT GTGCCTGAGC ATCAAAAAAC CTGCTTTAGG
CTAATTTTTC CTGCTGTTCA TAATGACATC GTTAGTCCAA CTTTTATCTA A
|
|---|
| Protein sequence | MNPAKSASKL IAVITDYLEQ DDILPVPQLR KLGMIYSSYR FIVSLFFMLM VYITVRTDGS
PSLPSFLQQT VLSFYVLLSL ILLGLFYTVG KHMRRQLAFG LALDVIILSL LLYTAGAPDL
QLTMLYMVVV AASFMLLHGS QALIITLLAI IFVIYQQFFY AIANSMSLAN LGSALLMSAS
FLAVGGLSWS ISQRLVQLEK VAVRHAKEVE RLNSINQEVI SQMVNGVIVI DDKQVVLANL
AAYQLLSIPS RHDNQSKPVA AFEQQLGQQH LQLFNACLSV AAGLTRTFIY ELPAVANSSI
IGKLRVDIIP LKDDSKLIIL EDLRREQASA QQLKLASLGQ LTASIAHEIR NPLAAISQAS
QLLIEDVIES EMDNDNALSP FANNDINSQM TGNHELYKMI FSQTKRVNRI IEDVLKLSRQ
QTANQQTIIL ADWMPVFLDN YFKGHDVFLH VLTQPTISFD IHQLEQVLIN LINNGLRYSS
YAHPHAFVEI EIYCADNDVI IDVLDGGTGV NADDLSALFN PFFTTEQSGT GLGLYLSQAF
CEANQARLLY VPEHQKTCFR LIFPAVHNDI VSPTFI
|
|---|
| |