Gene Pcryo_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0626 
Symbol 
ID4033936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp745254 
End bp745787 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content41% 
IMG OID637973088 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_579893 
Protein GI93005456 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.137655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTGA TTAAAACTAA GTTAGCTGGC GTATTAATTA TCGAACCAAA GATTTTTGGT 
GATTACCGTG GTTTTTTTAA AGAAACCTTC AATGCTGAGC GTTATAAAGA ACTTGCAGGT
ATTGATTTAA CATTTGTACA AGACAATCAC TCGCGCTCAG GTAAGGGCGT ATTACGCGGT
TTGCACTTTC AGAAAACTAA GCCGCAAGGT AAGTTAGTTA GTGTCACGCT TGGCGCTGTT
TATGATGTTG CTGCTGATAT AAATCCAGAA TCATCCACAT ATGGAGAGTA CGTGGGTGTT
GAGCTGAGCG AAGATAATCA TCGTCAGCTC TGGGTACCGC CCGGTTATGC ACATGGCTTT
TTAGTTATGA GTGATGAAGT AGATTTTGTA TATAAGTGTA CTGATTACTA CGATCCTACT
GATGAAGGCG GTATAGCGTG GAATTGCCCC TTGCTCAATA TTGATTGGCC GATTAGTGAT
GTAAAGCTGT CAGATAAAGA TAAAGCCTAT GCGGGGTTGG AAGCTCATGT TTAG
 
Protein sequence
MQVIKTKLAG VLIIEPKIFG DYRGFFKETF NAERYKELAG IDLTFVQDNH SRSGKGVLRG 
LHFQKTKPQG KLVSVTLGAV YDVAADINPE SSTYGEYVGV ELSEDNHRQL WVPPGYAHGF
LVMSDEVDFV YKCTDYYDPT DEGGIAWNCP LLNIDWPISD VKLSDKDKAY AGLEAHV