Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0405 |
Symbol | |
ID | 4035274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 491925 |
End bp | 493283 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637972854 |
Product | permease for cytosine/purines, uracil, thiamine, allantoin |
Protein accession | YP_579672 |
Protein GI | 93005235 |
COG category | [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0202053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAATA TTCAAGGAGC CGTTGCTACG GCAGGCGTAA AAACAATAGA GCATAAAGGG GTTGGTGAAG AGAGCCTAGC GCCGCAAACC ACACGAATTA TGGGCTCTTG GTCTTATTTA TTTACTTGGT TAGGTGGGTG TGTCTCTATT GGTACCTTCA CCGTTGGGTC AGGTTTGGTT GGTACCCTTA ACTTATTACA AGTAGTGCTA GCAATCGCCA TTGGTTGTAC GGTTATTGGT GCAGCGCTCA TGATTAACGG TCGCGCAGGT CATAAATATG GCATCCCGTT TATGGTGCAA AGTCGTTCAT CTTTTGGTTT CACTGGTAGT CGCATACCAG CACTGGTGCG CTCTGTACCT GCGATTGTCT GGTTTGGCTT TCAGAGCTGG ATTGGTGCTG GTGCATTAAA TTTGGTGTCT GATGCTTTGT TTGGCTACAG CAATATAGTC GTCTTCTTTG TTGGTTTTCA GTTTTTACAA ATTGGTCTGT CCGTTTTGGG TTTTCATGGT ATCAAATGGC TTGAAAACAT TGGCTCAATT TTTATTATTG GTTCACTGAT TTACATGTTT ATTAGTGTGA TTAATAAATA TGGTGATGTG ATTTCAACCA ATCTTATCAA TACAGAAGGG ACTTGGGGAG CGCCATTTTG GGGCGCAACC ATGCTGTTTT TAGGCGTTTA CAGTACGATG ATGCTTAACG TCTCCGACTA TTCGCGTGAA CTAAAAGAAG ATGTTGGTCT TTTTCGTCAA GTAGCCATCT ATGCCAACTC TATCCTACCT GCAACATTGT TTATGGGTCT AATTGGTGTG ATGGTGACCA GTGCGACTGG TGAAGTTGAT CCTATCAAGG TATTTTCTAG CGCCGTTGAT AACAAACCTT TATTAATCAT TACGATGCTT TTCATTGCTT TTGCGCAGGT CACTACCAAT ATCTTAAACA ACGTCGTACC GCCTGCTTAT GCATTAATGG ATATCTTCAA AATTAAGTAT AAAACCGCTG CAGTTATTGT TGGGTTGCTT GCCTTTGGAA CATTCCCTTG GGAGCTAGTA AAAGATGAAT CTGCTGCGGG ATTAAACTTA TTTATTCAAA CTTACTCAGC ATTTTTAGGT CCTATATTTG CCATCTTAGT CGTTGACTAC TATTTCTTAC GTAAGCAAAA GCTGGATCTT GACAAGCTAT ATGATGAGAA CGGTCCCTAT AAGGGCGTCA ACATGGCAGC TGTTATCGCT ATGGTAGTGG GGATTGTAGT CGCTCTACTA TTCTCAAGTA TCTCTTGGTA TGCAAGCTTA ATTCCAGCAG GCGCTATCTA TTGGATCTTG ATGTTAAAGA TGCCGGCTGC ACAGCGTTTT ATGTCATAA
|
Protein sequence | MDNIQGAVAT AGVKTIEHKG VGEESLAPQT TRIMGSWSYL FTWLGGCVSI GTFTVGSGLV GTLNLLQVVL AIAIGCTVIG AALMINGRAG HKYGIPFMVQ SRSSFGFTGS RIPALVRSVP AIVWFGFQSW IGAGALNLVS DALFGYSNIV VFFVGFQFLQ IGLSVLGFHG IKWLENIGSI FIIGSLIYMF ISVINKYGDV ISTNLINTEG TWGAPFWGAT MLFLGVYSTM MLNVSDYSRE LKEDVGLFRQ VAIYANSILP ATLFMGLIGV MVTSATGEVD PIKVFSSAVD NKPLLIITML FIAFAQVTTN ILNNVVPPAY ALMDIFKIKY KTAAVIVGLL AFGTFPWELV KDESAAGLNL FIQTYSAFLG PIFAILVVDY YFLRKQKLDL DKLYDENGPY KGVNMAAVIA MVVGIVVALL FSSISWYASL IPAGAIYWIL MLKMPAAQRF MS
|
| |