Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0328 |
Symbol | |
ID | 4034091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 396578 |
End bp | 397312 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637972777 |
Product | amino acid ABC transporter permease |
Protein accession | YP_579596 |
Protein GI | 93005159 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4215] ABC-type arginine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTGACT TACAAGGATT TGGCGCGCTT TTATTGAGCG GCGCTACCGT CACCATACAG CTTGCCATGA CCAGTCTGAT CATCGGCATG GTCTTAGGTT TGCTCGGTGC CACAGCAAAG CTGTCTAATA TCTGGCTGCT GCGCAAAATT GCGACTGTCT ATACCGCCAC GATGCGCGGT ATTCCTGAGC TACTATTGGT ACTGTTTATC TACTATGGTG GCTCTATACT GCTAATGAGC ATCCTCAAAA AGTTTGGCTA TAACGACTAT GTCGAGATTA GTGCTTTTTG GGGCGGCGTG ATGGCACTTT CTATTGCTTT CGGTGCTTAT GCGACTGAAA TCTTCCGTAT GTCGATTCAA GAGATTCCTA TAGGACAGCG AGAAGCGGCG CAAGCGATTG GTATGCGTCC TTTTCAGACT TTTTATCGCA TAACCTTACC TCAAGTATGG CAGATTGCAT TGCCAGGTTT GGGTAATCTA TTTTTGGTTT TGCTTAAAGA TACGGCACTG GTGTCGGTCG TAGGTCTCAA AGATATCATG TATCAGTCCT CGCGCGCCGC GCAATCAACA CAGCAGCCAT TTACCTTTTA TATGGCAGCG GCAATAATTT ATTTAGGTTT GACCATGCTG ATTACTGGCT TTATGATGTG GCTTGAATGG CGTGCCAATC CGGCAGCGCG TTATGCTAAA AAGCTCAGCC GTCAAACCAC TCACCGTCAA TCGACCATAG GATAA
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Protein sequence | MFDLQGFGAL LLSGATVTIQ LAMTSLIIGM VLGLLGATAK LSNIWLLRKI ATVYTATMRG IPELLLVLFI YYGGSILLMS ILKKFGYNDY VEISAFWGGV MALSIAFGAY ATEIFRMSIQ EIPIGQREAA QAIGMRPFQT FYRITLPQVW QIALPGLGNL FLVLLKDTAL VSVVGLKDIM YQSSRAAQST QQPFTFYMAA AIIYLGLTML ITGFMMWLEW RANPAARYAK KLSRQTTHRQ STIG
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