Gene Pcryo_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0328 
Symbol 
ID4034091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp396578 
End bp397312 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content47% 
IMG OID637972777 
Productamino acid ABC transporter permease 
Protein accessionYP_579596 
Protein GI93005159 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGACT TACAAGGATT TGGCGCGCTT TTATTGAGCG GCGCTACCGT CACCATACAG 
CTTGCCATGA CCAGTCTGAT CATCGGCATG GTCTTAGGTT TGCTCGGTGC CACAGCAAAG
CTGTCTAATA TCTGGCTGCT GCGCAAAATT GCGACTGTCT ATACCGCCAC GATGCGCGGT
ATTCCTGAGC TACTATTGGT ACTGTTTATC TACTATGGTG GCTCTATACT GCTAATGAGC
ATCCTCAAAA AGTTTGGCTA TAACGACTAT GTCGAGATTA GTGCTTTTTG GGGCGGCGTG
ATGGCACTTT CTATTGCTTT CGGTGCTTAT GCGACTGAAA TCTTCCGTAT GTCGATTCAA
GAGATTCCTA TAGGACAGCG AGAAGCGGCG CAAGCGATTG GTATGCGTCC TTTTCAGACT
TTTTATCGCA TAACCTTACC TCAAGTATGG CAGATTGCAT TGCCAGGTTT GGGTAATCTA
TTTTTGGTTT TGCTTAAAGA TACGGCACTG GTGTCGGTCG TAGGTCTCAA AGATATCATG
TATCAGTCCT CGCGCGCCGC GCAATCAACA CAGCAGCCAT TTACCTTTTA TATGGCAGCG
GCAATAATTT ATTTAGGTTT GACCATGCTG ATTACTGGCT TTATGATGTG GCTTGAATGG
CGTGCCAATC CGGCAGCGCG TTATGCTAAA AAGCTCAGCC GTCAAACCAC TCACCGTCAA
TCGACCATAG GATAA
 
Protein sequence
MFDLQGFGAL LLSGATVTIQ LAMTSLIIGM VLGLLGATAK LSNIWLLRKI ATVYTATMRG 
IPELLLVLFI YYGGSILLMS ILKKFGYNDY VEISAFWGGV MALSIAFGAY ATEIFRMSIQ
EIPIGQREAA QAIGMRPFQT FYRITLPQVW QIALPGLGNL FLVLLKDTAL VSVVGLKDIM
YQSSRAAQST QQPFTFYMAA AIIYLGLTML ITGFMMWLEW RANPAARYAK KLSRQTTHRQ
STIG