Gene Pcryo_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0299 
Symbol 
ID4034509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp360057 
End bp361079 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content45% 
IMG OID637972748 
Productlysine--tRNA ligase 
Protein accessionYP_579567 
Protein GI93005130 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00462] lysyl-tRNA synthetase-like protein GenX 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.631971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAG CCAATAGTCA GCCTTTATCT AATCTAAGCT ATGCCCCAAC GATGACCTTT 
GCAATGGCGC AGCAGCGTGC AAAATTAATG AGTGTCATTC GTCAGTTTTT TGCTATGCGT
CAAGTATTAG AAGTGCAGAC GCCGCTATTA TCGCAAGCAG GCAATACCGA TACCTTTTTG
CAATCCGTAG CCGCACAGGT CACGTATCAA GACAAACCTT GTACTTATTA TCTGCATACG
TCACCTGAGT TTGCCATGAA GCGTTTGCTT GCCAGCTGGC AGGTGCCCAT TTATCAAATC
TGTCCGGTCT TTCGAGATAA TGAGATCGGG GCGCGCCACA ATATCGAATT CACCATGCTT
GAATGGTATC AGCCAAATTA TAGTCTGGAT GGTCTGGCAG CAGAGCTTGG TGAATTATTA
GAGATGGTCT ATGGTCATCC GATAATCATG AGTCATTATC GCTACGTTGA TGCTTTTATG
GATTTTGTTG GTATTCACCC GCTGACCGCC AGTCTAGCAG CATTACAAGC CGTGGCAGAA
GACAAAGATC TGATAGGATT TGATTTTAAT AGTGCAGAGA GCTGCGATAG CGAACAAGAC
CGTCGTCAAA GCTGGCTGGA TTTACTATTT AGCCATGCTG TTGAGCCAAA TTTGGGTCAC
GATTTGCCGA CATTGATTAT TGAATATCCG CCTGCAACAG CTGCTTTAGC AAAAACCGCT
ATTGATAAAG AGGGGAATAA AGTCGCCAAA CGTTTTGAGC TGTATATCAA AGGAATCGAG
ATTGCCAACG CTTATGATGA GTTAGCAGAC GGGCAGGCGT TAAGGGAACG GTTTGAACAG
GACAACAAAT TGAGAGGGCG TCATAACTTG CCACAAATGC CTATTGATGA GCACTTAATA
GCAGCGTCTG ATGATTTGAT ACCTTGTAGC GGGATTGCTG TCGGTTTAGA TAGGCTGCTG
ATGGTATTGA CAGATGCAAC GAGCTTAGAA GAAGTTATCT CATTTCCTAG TGGTTCGGCT
TAG
 
Protein sequence
MSKANSQPLS NLSYAPTMTF AMAQQRAKLM SVIRQFFAMR QVLEVQTPLL SQAGNTDTFL 
QSVAAQVTYQ DKPCTYYLHT SPEFAMKRLL ASWQVPIYQI CPVFRDNEIG ARHNIEFTML
EWYQPNYSLD GLAAELGELL EMVYGHPIIM SHYRYVDAFM DFVGIHPLTA SLAALQAVAE
DKDLIGFDFN SAESCDSEQD RRQSWLDLLF SHAVEPNLGH DLPTLIIEYP PATAALAKTA
IDKEGNKVAK RFELYIKGIE IANAYDELAD GQALRERFEQ DNKLRGRHNL PQMPIDEHLI
AASDDLIPCS GIAVGLDRLL MVLTDATSLE EVISFPSGSA