Gene Pcryo_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0188 
Symbol 
ID4035668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp219123 
End bp221078 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content44% 
IMG OID637972634 
Producttetratricopeptide TPR_2 
Protein accessionYP_579456 
Protein GI93005019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTTTT TTGGGTCTTC ATTTAGACGA CAATCTATGC ATAATGCTCA ATCTAGCCTT 
AGTGCTTTGT TGCATGCTCT CATTGATCGG CTATGCCAAC GTTATAAGCT AGCGTTTTCG
TTGGCGGTTT GTTTGTGCCT AGGATTCCCT GCCCATGCTG ACCATGCCAT TGTCTCACCA
AACATAGCTT TGCCCAAAGT CTCTCCTACT AACATTAGTA GTGCCACCGT TACCAGAACC
ATTAATGCCT CTAGTCAAGT TATTAACAGT CACACACCAG TGACTAAAAG CATGGCTAAT
AAAAATTTGA TAACTGATGC CTCGATAACC GAAGGTAGTC CGTCATCTGA CCTCAATAAA
ATAAGCAATG AACCAAGCTT GTATGCCTTA TTAGATGCAG AATTTTCTGC AAATCGTGAT
GATACCGAGC GTGCGCTGAT TATCTATAAG CAGCAATCAT TTAAACAAGA CGCCACAGCC
GTATTTGAAA GAGCGTTAAG CTTATCATTA CGTAATGACA GGGTCGAAGA ATCTTTACAA
TTTGCCAAAG CATGGCAAGA TGAAAACCCA GACCATGTGC CGGCTTGGTT TTATGTCGCT
CATTTGGCAC TGCGAGCGCA CGATTATGAG TTGGCAGGCG AAACTCTAAA TCGCATCTTG
AGCTATGATC CTCGCGCCGA CCTTAGCGAA ATTCTGATTG GCATTTATCC AAACAGCGAT
GATGATAAGC GAGAGTTACT CGCCGCTCTG CAACCTATCG CAAGTGAACA AAACGCCTCG
CTGTCAGTCT TAAAAGCTGG CTTGCTTTAT CAGTTTAATG AACCTGAGAT TGCCATCGTT
CATATCAATC GAGCAGTTGA GCGCCAGCCG GATTATGTGC CTTTTATTAC CTTAAAAGCA
GATATCCTGC GCAAAATCGA AACGCCAGAA GCAGTCATTG AGTATCTCAG CCAAGCACGC
TTGCGTAATG CTGACAGTAA GAATCTATAC TTGTATGAGA TTCGCTATTT GCTTGATTTA
AAACAGAATG AGCAAGCGTG GCAGCTGTTA TTAGACGCTC ATCAGCGCTT TGCCGATGAT
GCTGAGATTA CCTTATTAGC GGCGCTGGTT AGCTTAGATA TCGAAAAATA TACTAGTGCC
GATCAATTGC TTAATACGCT TGCCAAAAAT CCCGCTTATT TAGATCAATC TTATTATTAT
CTGGGCATCA GTGCCGAGCG TCAGCAAAAC TTTGAACAAG CCAAATACTA CCTCAATGCT
GTCATGCAAG AGGACTTGGT ATTGGAAGCT CGACGAAAAG TGGTCGCATT AGACTTACTC
AATAATAATG TTGATGCCGC TATCGCAACG TTAGAAAAGC TGCGTAAAGA CTTTAGCGTC
TTCGCTCCTG ATAGCTTTGT GCTACAAGCG GATATCTTAT GGCAACAGAA TGAACCTGCA
GAAGCCTTAC GCCTATTAAC TAAGGCTGCT CGTAAATACC CTGATAATGA GATGCTGCTT
TTTGCACGCG CCCAGCTCCT TGATGATAAA GAGGACTATA TCGTCAAGCG TACCTTACTT
AATCACTTGC AAGCGCTTGA CCCCAGCAAT CCTGCTTATC AGCTGAGTTA CGCCCAGTTA
TTGCTGGCCA ATGAGCGTGG TTCTGAGCAA GGATTGACGT TGGCGACAGC GATCATACAA
ATACGCTACG ATGACCCTCG CTATGACAAT GAGCTGCACC TGCAAGCTCT CAATGTACTG
GCAAGTAATG CGCTGGCAAA CGAGAATTAT CAGCAAGTGA TCGACTATCT GCAAACGCCT
TACGATGTGC TCCCTACTTT ACGCTCAGGG ACATTGCTAT TACGCGCTTA TCAAGGCTTA
GGCGACAATG AAAAAGTTGA CGCTTTACTT GCCGACTTGC AGCAGCGCTT CTCATTTGGG
CAACACAATA TCAATGACCG TATACAATTG TATTAA
 
Protein sequence
MVFFGSSFRR QSMHNAQSSL SALLHALIDR LCQRYKLAFS LAVCLCLGFP AHADHAIVSP 
NIALPKVSPT NISSATVTRT INASSQVINS HTPVTKSMAN KNLITDASIT EGSPSSDLNK
ISNEPSLYAL LDAEFSANRD DTERALIIYK QQSFKQDATA VFERALSLSL RNDRVEESLQ
FAKAWQDENP DHVPAWFYVA HLALRAHDYE LAGETLNRIL SYDPRADLSE ILIGIYPNSD
DDKRELLAAL QPIASEQNAS LSVLKAGLLY QFNEPEIAIV HINRAVERQP DYVPFITLKA
DILRKIETPE AVIEYLSQAR LRNADSKNLY LYEIRYLLDL KQNEQAWQLL LDAHQRFADD
AEITLLAALV SLDIEKYTSA DQLLNTLAKN PAYLDQSYYY LGISAERQQN FEQAKYYLNA
VMQEDLVLEA RRKVVALDLL NNNVDAAIAT LEKLRKDFSV FAPDSFVLQA DILWQQNEPA
EALRLLTKAA RKYPDNEMLL FARAQLLDDK EDYIVKRTLL NHLQALDPSN PAYQLSYAQL
LLANERGSEQ GLTLATAIIQ IRYDDPRYDN ELHLQALNVL ASNALANENY QQVIDYLQTP
YDVLPTLRSG TLLLRAYQGL GDNEKVDALL ADLQQRFSFG QHNINDRIQL Y