| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2988 |
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| Symbol | |
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| ID | 3725695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3497105 |
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| End bp | 3499525 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637752599 |
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| Product | putative small-conductance mechanosensitive channel |
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| Protein accession | YP_358393 |
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| Protein GI | 77920578 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000000510417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTC TGTTGATTTG TTGTGCAGTT TTATGGGGCT TTGCCATGCC TGCGCCCCTT
TGGGCCGAAT CGACCCCGGT CGACGTGGCG GCTGAAGATC CGGCACTGTT GCCCGGAGTC
GCGGAGGTTT ATCCGCGTCT GACAAAACTG ACGGAAGACC GTGCCGCGCT TGAAACCCGC
CTCGGTCAAC TGACCGGCCT GGCGTCCTCC AATCAGGCGC TTGCCGAGCT GAGACTCTGG
CAGGACAATT GGTCGAAGCG TCAGGCGGCG CTGGGGTATC CTCAGGAATG GCCTCTGGAT
CAGTTGCTTC AGGCGCGGAC CACCCTGCTG GCGCACAAGG ATAAAACGGC GCAGCTGCTC
GATGAAATTT TCAAACGCCT GACCGAAATT GAGGGTCTGC GGAAAACCTG GCAGGACGAG
GAAAGTTTCT GGCGCCAATG GCAGGCGGCA TTGCCGACGG ACAGCCCCCT GGCGCCACCC
GAAGTTTTTA AACAGGCCCG GCAAATGATC GAGCAAGCTC TTGACCTGCT GGATCGTAGC
GATCCCCAAT TGGTTGCCTT GCAACAGGAA GTCAGCAGCC TGCAGAGTCC TCTCTCGGAA
CAGATCGGGC AGATCGAACA AATCCTCGCT TCGCGCAAAG GGCAATTGCT GGCAAGAAAT
CAACCGTCCT TTTTCAATGC CGAGTTTTAC CGGCAGCTCG ATCCCGGCCT GTTTGCATCC
GTTGGTGCCA CTTTTACCCG AATGAATTTA TTCAACAGCT TGTTCTGGAG CAACCACGCT
GGCCTAGTCG TGTTGCATGT TTTACTGATT TTTATCCTGG CCGGGCTGAT ACGTTCGCGG
GGCAAGCGCT GCGAAGAAAA ATCCGTGCGT CATTTTTCTT TGTGTCATCC TTTGTCTACC
GGTGTGTTTA TTTCGACCGT CGTGCTGGGC CCCCTCTACA GGCATGCCCC TTCCGGGATA
GTGGTGCTGC TTACCGCTGT GGGTGTGCTG TCGGCGTTAC CACTGATCGT GGGGCTTTTT
TCTCAACCGC TGCAGCGCCG GGTTATACGG TTGCTGGCTT ATGTCTACAT CCTGTCCCTG
GCGGTACAAT CGCTGGCCTT GCCCGCACCT TTTTATTCTC TGTATCTGGC TGGATTAGGC
TTGGCCGGCC TGGTTTTGCT GCGCTGGGCC ATGGTGCATT CGCTGCGTAC TGAACCCTAC
CCGCAGCGTT TCTTCAGGCG CCTGTTGATG GCGGGCATGG CCCTGTTCGG CGGCATTTTC
ATCGCCCAGG CAGGAGGGTA TGGGAACCTG GCCGAACATC TTCTGCACGC CGGTCTCAAA
ACCGTTTTCG TCGGTTTGCT CACAGCCCTG GTTTTGCATC TGCTGCACAC CGGAATGCTG
ACACTGGCGA AACTCGATGT CTTTCACAGG CAGCGGTTTT TCCTGCGGCA TGGTCAGGAG
TTGCAAAAAC GCATCTGGCA TCTGGTGCCG ATCGTTGTCA TCACCTATGC CGCCCTTTAC
CTGATGGTGG TATGGCGCCT GTTCGACAGT GTGGGCGAAG CCTGGCATGC GATCGTATCG
GCCGGAGTCG CCTTCGGCGA CAAAACCGTT TCCGTGCAGA TGCTGCTGAT TGGTCTGGCG
GCCCTGTATC TCACTTTTCT GGTATCCTGG TTGTTGCGCA GCTTGCTGGA AGAAGAGGTG
TTTCCGCGTC GGCAGATGGA TCGCGGTGTA CGGGATTCCA TCAACAAACT GCTGCACTAT
GCGATTCTGG CTTTCGGTGT CCTGATGGCG CTGAGCCTGG CCGGCATCGA GCTGAAAAAC
TTCGCGGTAC TGGCCGGCGC CCTCGGTATC GGTATCGGTT TCGGACTTCA GAATATCGTC
AATAACTTTG TCAGCGGTCT GATACTGCTG TTCGAACGCC CGATAAAAAT TGGCGACATG
ATTGTTCTGG ACAACGAATG GGGCACGGTC CGCAAAATCG GCTTGCGTTC CACCACCGTC
GAAACCTTCG ATCAATCCGA AGTCATCGTG CCGAACTCCA ACCTTGTCTC CGAAAAGGTT
ACCAACTGGA CTCTTTCCAG TGAACAGAGC CGCATCGTGG TACCGGTCGG CGTGGCCTAC
GGCAGCAATT TGGAAAAGGT TTTACGCATC CTCCACGAAG CGGCCAAGGC ACATCCCAAA
GTGCTGGATA CACCGCCGGC ATCCGCCATC TTTACCGCCT TTGGAGACAG TTCCCTCGAT
TTCGAGCTGC GCGTATGGGC CACATCTGTT TCTGAACGCC TGATTATCAA AAATGATCTG
CTGTTATACA TTGACCGCCG CTTTCGCGAA GAAGACGTTG AAATTCCCTT CCCGCAGCGC
GATCTTCATC TGCGTTCGGT GGACGATCAT ATCCTTGGGA AATGGGATCC GTCCGCCATC
GGCAAGCCCC CGGTGCAATA A
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| Protein sequence | MKRLLICCAV LWGFAMPAPL WAESTPVDVA AEDPALLPGV AEVYPRLTKL TEDRAALETR
LGQLTGLASS NQALAELRLW QDNWSKRQAA LGYPQEWPLD QLLQARTTLL AHKDKTAQLL
DEIFKRLTEI EGLRKTWQDE ESFWRQWQAA LPTDSPLAPP EVFKQARQMI EQALDLLDRS
DPQLVALQQE VSSLQSPLSE QIGQIEQILA SRKGQLLARN QPSFFNAEFY RQLDPGLFAS
VGATFTRMNL FNSLFWSNHA GLVVLHVLLI FILAGLIRSR GKRCEEKSVR HFSLCHPLST
GVFISTVVLG PLYRHAPSGI VVLLTAVGVL SALPLIVGLF SQPLQRRVIR LLAYVYILSL
AVQSLALPAP FYSLYLAGLG LAGLVLLRWA MVHSLRTEPY PQRFFRRLLM AGMALFGGIF
IAQAGGYGNL AEHLLHAGLK TVFVGLLTAL VLHLLHTGML TLAKLDVFHR QRFFLRHGQE
LQKRIWHLVP IVVITYAALY LMVVWRLFDS VGEAWHAIVS AGVAFGDKTV SVQMLLIGLA
ALYLTFLVSW LLRSLLEEEV FPRRQMDRGV RDSINKLLHY AILAFGVLMA LSLAGIELKN
FAVLAGALGI GIGFGLQNIV NNFVSGLILL FERPIKIGDM IVLDNEWGTV RKIGLRSTTV
ETFDQSEVIV PNSNLVSEKV TNWTLSSEQS RIVVPVGVAY GSNLEKVLRI LHEAAKAHPK
VLDTPPASAI FTAFGDSSLD FELRVWATSV SERLIIKNDL LLYIDRRFRE EDVEIPFPQR
DLHLRSVDDH ILGKWDPSAI GKPPVQ
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