Gene Pcar_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2972 
Symbol 
ID3725679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3483022 
End bp3483453 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content51% 
IMG OID637752583 
Productsecreted and surface protein 
Protein accessionYP_358377 
Protein GI77920562 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.143702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACGA TCATGGAAGC CATCGCTGCA GATCCATCAC TGAAGACCTT GAACAAGGCT 
TTGGGGATTG TCACAGGGGT CGTTGAGAGA TTGGGGCAAC CCGGTAGTTA TACCTTCTTC
GCACCTAACG ATGAGGCTTT TGCGCGCCTC AACATCGATC AGGTGCTGGC CGATGCCGGC
AAACTGGCGG ATATCCTCAA CTACCACCTG GTCGCGGAGA AATATACTGA AAAGGAAATG
GACGTCACAA ACCTTGACTC CATGGTCACG GAACTGGGCA AAAGCCTTTC CATCTATCTG
GACGAAAACG ATATCATGAT CGACAACGCG CACATCGTTA AAGCGGATAT CCAATGCAGT
AACGGGGTGA TCCATATTAT CGACAATGTT TTCCTGCCGC AACACTCCGG CTGGTATGAA
ACCATGGCCT GA
 
Protein sequence
MPTIMEAIAA DPSLKTLNKA LGIVTGVVER LGQPGSYTFF APNDEAFARL NIDQVLADAG 
KLADILNYHL VAEKYTEKEM DVTNLDSMVT ELGKSLSIYL DENDIMIDNA HIVKADIQCS
NGVIHIIDNV FLPQHSGWYE TMA