Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2972 |
Symbol | |
ID | 3725679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 3483022 |
End bp | 3483453 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637752583 |
Product | secreted and surface protein |
Protein accession | YP_358377 |
Protein GI | 77920562 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 0.143702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGACGA TCATGGAAGC CATCGCTGCA GATCCATCAC TGAAGACCTT GAACAAGGCT TTGGGGATTG TCACAGGGGT CGTTGAGAGA TTGGGGCAAC CCGGTAGTTA TACCTTCTTC GCACCTAACG ATGAGGCTTT TGCGCGCCTC AACATCGATC AGGTGCTGGC CGATGCCGGC AAACTGGCGG ATATCCTCAA CTACCACCTG GTCGCGGAGA AATATACTGA AAAGGAAATG GACGTCACAA ACCTTGACTC CATGGTCACG GAACTGGGCA AAAGCCTTTC CATCTATCTG GACGAAAACG ATATCATGAT CGACAACGCG CACATCGTTA AAGCGGATAT CCAATGCAGT AACGGGGTGA TCCATATTAT CGACAATGTT TTCCTGCCGC AACACTCCGG CTGGTATGAA ACCATGGCCT GA
|
Protein sequence | MPTIMEAIAA DPSLKTLNKA LGIVTGVVER LGQPGSYTFF APNDEAFARL NIDQVLADAG KLADILNYHL VAEKYTEKEM DVTNLDSMVT ELGKSLSIYL DENDIMIDNA HIVKADIQCS NGVIHIIDNV FLPQHSGWYE TMA
|
| |