| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2909 |
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| Symbol | |
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| ID | 3725615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3396111 |
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| End bp | 3397010 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637752519 |
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| Product | multidrug resistance efflux pump |
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| Protein accession | YP_358314 |
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| Protein GI | 77920499 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 79 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACAC ATAAACTGAA AACCATATCG AGTATCGCCG TTACGCTGAT CATCTTCTCA
GCCGCCATAC TTACCAGCAT TGCCTTGTGG CAACGCTACA TGAATTCACC CTGGACCCGG
GATGGTCGCG TGCGGGCCGA TATCATCAAG GTTGCGGCCG ATGTCTCCGG CATCGTTGCC
AGCATGGCGG TGCATGATAA TCAGCTTGTG CATAAAGGGG ACCTGCTCTT CACCATCGAT
CAGGAACGCT ACCGTCTGGC GCTGGCCCAG ACCAGGGCGC GCCTGGCGGC CAGTAAAGCG
ACCATGGTCA TGCGCAGCCG GGAGTTCGAG CGGCGCGCAC AGCTGGGGGG AAAGGTGATC
TCCAATGAAA ATCGGGAGAA CTCACGGGCC CAGGCTGATG CCGCTGAGGC ACTTTATGAA
GAAGCGCAGG CGGCGTGCGC TGTGGCGGAG CTTAACCTTC AGCGTACCGA GGTGCGCGCG
CCCGTAGACG GCTACATTAC AAACCTTGCC ATCCATCCCG GCGATTATGT CACCGCGGGC
ACGCCGAAAC TGGCGGTGGT CGATAAAAAC TCGTTCTGGA TTTACGGGTA CTTCGAAGAA
AATAAACTGC GCCTGCTGCA GCGGGAGGAT CCGGTGGAAA TCAGACTTAT GAGTTCCGAG
ACACCTCTTC ATGGGCATAT CGAAAGTCTC GCACGCGGTA TCACCGACAG GGATAATCCC
ACCGGCAGCG AACTTTTGGC CAATGTCAAT CCCGTCTTCA ACTGGGTGCG ACTGGCGCAA
CGGGTGCCGG TACGGGTGCG GATCGACGAG GTTCCCGAGG AGGTGCCGCT TGCGGCCGGA
ATGACCTGCA CGGTTATTGT CAAACCGACT CTGGGGTCAA AACGCATACA AAAATTATAA
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| Protein sequence | MQTHKLKTIS SIAVTLIIFS AAILTSIALW QRYMNSPWTR DGRVRADIIK VAADVSGIVA
SMAVHDNQLV HKGDLLFTID QERYRLALAQ TRARLAASKA TMVMRSREFE RRAQLGGKVI
SNENRENSRA QADAAEALYE EAQAACAVAE LNLQRTEVRA PVDGYITNLA IHPGDYVTAG
TPKLAVVDKN SFWIYGYFEE NKLRLLQRED PVEIRLMSSE TPLHGHIESL ARGITDRDNP
TGSELLANVN PVFNWVRLAQ RVPVRVRIDE VPEEVPLAAG MTCTVIVKPT LGSKRIQKL
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