Gene Pcar_2888 details

Gene Information

• Locus tag: Pcar_2888
• ID: 3725594
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 3375208
• End bp: 3375744
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637752498
• Product: hypothetical protein
• Protein accession: YP_358293
• Protein GI: 77920478
• TIGRFAM ID: [TIGR02242] phage tail protein domain

Plasmid Coverage information

• Num covering plasmid clones: 56
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACGAC CTGATATCGA AGCGCTGTTG CCGACCGTCT TTCAGGACGC CATACGTGCG 
GAGACTCCCC TGGACGCTCT GCTGGAAGTG GCTGCGCGCC TGCCTGAGCC ATTAGAGGTG 
CTGCTCGCTT CGGTGGATAG CCTGTTTGAC CCCCGTCGCG CGCCGGACGG GATGGTGGCT 
TTTCTGGCGG CCTGGGTCGA TTTGGATCGC TTTCTGGTGC GCCGGCGGGC CGACGGTTCG 
GGCGGCGACC TGCCCGCGGG ACAAGGGTAT TTGCGGGAGC TATGCGCTGC TGCTGCGGAA 
CTTTCCCGGC ATCGGGGTAC TCGCCGGGGT TTGATCCGAT TTTTGGAAAT CGCCACCGGG 
CAGACCGGAT TTCGTATCGA GGAGAATCGC GATCGCAGCG GTGCGCCACG ACCTTTTCAC 
CTGGTGGTGA CAGCGCCTCA GGGGACCCAG GCTCATGCAG AGCTGATTCA TGCCATTGTG 
GCTTTTGAAA AACCGGCTTA TGTCACTTAC CGTCCTGATG AACTTTGCTT CGAATAA 

 

Protein sequence

MQRPDIEALL PTVFQDAIRA ETPLDALLEV AARLPEPLEV LLASVDSLFD PRRAPDGMVA 
FLAAWVDLDR FLVRRRADGS GGDLPAGQGY LRELCAAAAE LSRHRGTRRG LIRFLEIATG 
QTGFRIEENR DRSGAPRPFH LVVTAPQGTQ AHAELIHAIV AFEKPAYVTY RPDELCFE