Gene Pcar_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2817 
Symbol 
ID3725522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3286941 
End bp3287369 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content59% 
IMG OID637752426 
Producthypothetical protein 
Protein accessionYP_358222 
Protein GI77920407 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAAA CTATCTTCGA CATCCTGACA TCCGATCCCT CCGGCGAATC ACGGGGCGAG 
CTCAGATCTT CCGAGGAAGA TCTGTACCTG AGCATCCGGA ATCATCTGCG GCGGCTGTTC
AATTCGCGGC GAGGCTCCCT GACCCATCTG CCGCACTTCG GCATGCCCGA TATCGCCGCC
CTGTATCTGG AGCTGCCCTA CACCAGCGAC CGGATCATGA GCGCCCTGCG GCAGTGCGTG
ATCGAATTCG AGCCCCGTCT GGGCCATCCT CATGTCCGCG CCATTCACCA CGAAGATGAT
CGGGACGTTA CCCAGTTCGA ACTTTTCGGC GAAACCCCTT TGGGTCGCCG TGTCAAATAT
ATCGTTTCGC TGTATCGAAC CGGCGCCGTC GAGGTGGCCA CCACCTGGGA GCAATACACC
CATGGGTAA
 
Protein sequence
MSQTIFDILT SDPSGESRGE LRSSEEDLYL SIRNHLRRLF NSRRGSLTHL PHFGMPDIAA 
LYLELPYTSD RIMSALRQCV IEFEPRLGHP HVRAIHHEDD RDVTQFELFG ETPLGRRVKY
IVSLYRTGAV EVATTWEQYT HG