Gene Pcar_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2788 
Symbol 
ID3725493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3251025 
End bp3252479 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content59% 
IMG OID637752397 
Producthypothetical protein 
Protein accessionYP_358193 
Protein GI77920378 
COG category[S] Function unknown 
COG ID[COG5316] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGAA TACGGCTTTT ATTGCGGATC TTTGTGGCTT TTGCTCTGAC AGGGAGTATC 
TCTGCCGCGT TCGCAGGCAC AGAAATAACG GAACTACGCA GTACGCCTGC CGATCAGCAG
CAAGTGGCGG TGACCATCTA CAACAGTAAC CTGGCCCTGG TCAAGGATCT GCGTCGCTTG
ACTCTGCCGC CCGGAGAAAA TCTGCTGGCC TGGCGTGGAG TCGCGGCCGG TATGCAGCCG
GAAACGGCTC TTTTGCGGCC GGTTAAGGGC GCTGGTGACT TCCGGGTAGT GGAGCAGAGT
TTCGATTTCG ACCTGTTGAC CCCCGGCAAG TTGCTGGAAA AATATGTCGG CCGCACAGTG
CAGGTCGTAA GGGTGCATCC GCAGACCGGT GCCGAAACCG TCGAGTCAGC CCGGGTGCTG
GCGGCCAACG GCGGGGTGGT GCTGCGCATG GGGGATCGCA TTGAAACCGG CGTTCCCGGA
CGCCTGGTCT ATCCCGACGT GCCGGCCAAC CTGCGCGATC GTCCGACCCT GGTGGTGCAG
GTGGCGACCG ATAAAGGCGG AACGCGCGAT CTGGAGCTGA GTTATCTGAC CGGTGGTTTA
TCCTGGCAGG CCGATTACGT GGCCGAACTC GACGATCGGG ATGCGCATCT TGACCTGTCC
GGCTGGGTAA CGCTGAACAA CCAGAGTGGC GCCACTTACA ATCAGGCACG TTTACAACTG
GTGGCCGGCG ATGTGCACCG TGTCGGCCGG CAGGGTATGG GCCGGCAGGT TTTTGAGGAG
CGGGCCATGA AGGTCATGGC CGCCGCACCC GCCATGGCCG AGGAGAGTCT GCTCGACTAT
CATCTCTACA CCCTCGAGCG TCTCACCACC ATCCGTGAAA ACCAGGTCAA GCAGGTCGCT
TTGCTGAATG CCTCCGGCGT TCCTGTGAGC AAGGAATACC TGCTGCGCGG CGGCGAATAT
TACTACCGCG GGCGTCACGG TATGCTCGGC AAAAAACTCA AAGTGGCGGT ATACCTGGAA
TTTAACAACA GTACCAAGGC CGGACTGGGA ATCCCTCTGC CCAAGGGCGT TTTGCGGGTC
TACAAAAAAG ATACCGCCGG CAACGCCCAG TTTGTCGGTG AAGATCGCAT CGATCACACC
CCCAAAAACG AAAAAGTTCG CCTGCGCCTT GGCGACGCTT TCGACGTGAC GGCCGATCGC
ATCCAGACCG ATTACAAAAA AATTGCCGGC GGACCATCGG GAACGGTCAT CGAGACGGCC
TATCGGCTCG AGTTGAAAAA TGCCAAACGC CAGCCGGTTA CGGTCAAGGT CGAGGAACCG
ATGCCCGGGG ACTGGCGGAT CCTGCAACAA AGCCACGCCC ACACCAAAAA AGATGCCCAC
ACCGCTACCT GGCAGATCGC CATCCCCGCC GAAGGCAAGA CCGTGTTGAC CTACCGGGTG
CGGGTGCGGT ACTGA
 
Protein sequence
MMRIRLLLRI FVAFALTGSI SAAFAGTEIT ELRSTPADQQ QVAVTIYNSN LALVKDLRRL 
TLPPGENLLA WRGVAAGMQP ETALLRPVKG AGDFRVVEQS FDFDLLTPGK LLEKYVGRTV
QVVRVHPQTG AETVESARVL AANGGVVLRM GDRIETGVPG RLVYPDVPAN LRDRPTLVVQ
VATDKGGTRD LELSYLTGGL SWQADYVAEL DDRDAHLDLS GWVTLNNQSG ATYNQARLQL
VAGDVHRVGR QGMGRQVFEE RAMKVMAAAP AMAEESLLDY HLYTLERLTT IRENQVKQVA
LLNASGVPVS KEYLLRGGEY YYRGRHGMLG KKLKVAVYLE FNNSTKAGLG IPLPKGVLRV
YKKDTAGNAQ FVGEDRIDHT PKNEKVRLRL GDAFDVTADR IQTDYKKIAG GPSGTVIETA
YRLELKNAKR QPVTVKVEEP MPGDWRILQQ SHAHTKKDAH TATWQIAIPA EGKTVLTYRV
RVRY