| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2714 |
|---|
| Symbol | |
|---|
| ID | 3725419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 3169153 |
|---|
| End bp | 3171504 |
|---|
| Gene Length | 2352 bp |
|---|
| Protein Length | 783 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637752324 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_358120 |
|---|
| Protein GI | 77920305 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGTGA ACCCATCCGA TTGCCGGAAC TATCTGCAGC GGCTTGCCGC CCGGGACAGG
TTTTTGAGCA CCGTGGATCA GCAACCGCAA CTCGATGCCC TGATGCGGGA TCTGTCCGCC
GCCATCGACG AGGCCCTTGC CCAGGGCCAT ACCGACCTGG CCGCCATCGA CGAAAGCCTG
GACAACGAAC TGCTGGAGGT TGCCGGCAAC CTCGCCAGCA GCAGGGAGCT GCTGACCAGG
GCTTTCGAGC AGGTACGCAG CGCCTCCCCT TTGCAAAGCG AAGACCTCGT CCAGCTATCA
CGCACCATCG AAGCGCGCAT CTTATGGTTG TATGACCGGG TGCGGGTACG CCAGGAACGC
AGTTTGAATC AGGTCCGTCC CCAAAATCGG TCCTGGAACA AAATTTTGCA GCACGTTGCC
GAGGCCATAG ATCATGCTTT ACGCAACCAA CCGGAAGAAC TGACGCTGAT CCGCGACCGC
CAGCAGCAGC AGGAACCAGG GGGCCGAAGT ATCTGGCAGA TCGAAGCCCC CCCCCTGATA
CAAACCGCAT GTACCGGCAG TTCCCGCCTG ACAACGCGCC TGACATTTGC ACGCTTGCGT
TATCGACTGG GTCGGCGTTA CCAGATCCTG CAGCCGGTGG TACAGGACGC TTTTACCCGA
CACCGCCCCG CCATGCTGCA GCCGGATCAA AAACCGCTCG AGGGGGACTA TGTTCAGCGT
CACGAGCAGG TTAGCCATGA TTTTTCCGAT ATGTGGCGGG GGCTGCGCTT CAATCTCGAA
ACGGCGGCTG AAGACTGTCA TCGGCTTGCC GCCCAGGCTG CAGGCGACAC GGTGGATTCC
GGCCAACTCC AGCAGCAACT CACCGAAACA GGCAAACTGG TGACGGAGGT CCTGGAACGC
ACCGAACAGC AACTTGCGCC TCTTGCCGAT CCCCTCAAAG AGCTGTCACA CCAACTGTTG
GAAAGACTCG AGAACGAATG CAGGGAAATG CTGGATCTTA TCCCTAAAGA TCTGCAGCGG
GTGTTAAGCC GGGGGGAACG CCTGACGCAT AAACGCCGCC GTCTTCTGCG CACATGGCGA
CGCAACTATA CGCAGTTCCG AAAAGACCTG CAGCCCCTCA TGGCGCGTCT TGATCTTATG
TGGCAGTTCC TTGTTCAAGG AATCATGGGG TTACGCCCCG GTGGGGACAA AATTGCCAAA
AGCGAATCCA TGCTGCGCAG CATCGCTGAC CTGCCGACTC CGGAAGCCAT CCTGCAGCGA
GCTGGCGAAC TGCCGCCGGT ATGTCGCCGG ATGTTCACCA GTGGCGCCCT TAAAAATCGC
GAATTCATGA TCGGCAAAAA TAAAGATCTC GATACCCTGC GCGAGCTGTT CAAGCGGTGG
CAGGAAGGGC TTCTGTGCAG CATCGCGGTA ACCGGACCCG ACGGCAGTGG CAAGACCTCT
CTGGTCAATT GTTTTCAAAG CGAATTGGGT ACACAGTGGC CGGTATTGCG CTTTTCCATC
GACAGCCGGC TTACGAACGA ACCCCAATTA TTAGAAGCCT GCCGGCAATG GTTGGAACTG
GCAGAACCTC CCGCCGATCT GGATGCCGTG GAAGCGTATC TCAACAATCT GCCGCGCGGT
GTCATCATCG TGGAAAATCT TCATAATCTG CTGCTGCGCA CCGTCGGTGG TCTGGATGTC
GCGCGGGCCT TTTTGCGGCT GGTTCTGGCC AGCCGTCACC GTCAGCTGTG GGTGGTAACG
GTTCGAAAAT ACCCCTGGCA TCGCATGCGC TACCTGCTCA CCATGGATCG CTACTTCACG
CACCAGGTAC ATACCCTGTT CAACAGTCAG TCCGAAATCC GTGATGCGTT GCTGCTGCGC
GTACACACCA GCAGTTATCC TGTAACCTTC CTTAATGGCC AGGAAGAGGC TATCAGCCAA
AAACCGGCCA CCGGCAAAGA CGAGCAGACC AGCCGGCAGG ATCGGTTTTT TGCCGATCTG
TTTGCCGCCA CCCGCGGCAA CATGCAAGCA GCCCTCTATT ACTGGCTGAT GAATCTGGAA
TACGATGAAC AGCAACAAAC TTTACTGGTA AGCCCCATGG GCAAAATCGA TTACGGTCCG
CTGCGCTCCC TCGATCGCGC TCAGCTTTAC GCCCTGGCCG AAGTCATTGC CCACGGGGGG
CTGAGCATCT CCGAACATGC CACTATTTTC GGCGGCAGTT CACTGCAAAG TCGCATGCTT
TTGGACCATC TGGCCCAACT CAACCTGTTG CAGTATCCGC ATGAACAGAA CCCGACAGCA
GCCTATCAGC TCAACCCGCT GTTTTTTGCA CCGATTACTT CCTTATTGGA ATCCCGCAAC
ATCATCCAAT AG
|
|---|
| Protein sequence | MAVNPSDCRN YLQRLAARDR FLSTVDQQPQ LDALMRDLSA AIDEALAQGH TDLAAIDESL
DNELLEVAGN LASSRELLTR AFEQVRSASP LQSEDLVQLS RTIEARILWL YDRVRVRQER
SLNQVRPQNR SWNKILQHVA EAIDHALRNQ PEELTLIRDR QQQQEPGGRS IWQIEAPPLI
QTACTGSSRL TTRLTFARLR YRLGRRYQIL QPVVQDAFTR HRPAMLQPDQ KPLEGDYVQR
HEQVSHDFSD MWRGLRFNLE TAAEDCHRLA AQAAGDTVDS GQLQQQLTET GKLVTEVLER
TEQQLAPLAD PLKELSHQLL ERLENECREM LDLIPKDLQR VLSRGERLTH KRRRLLRTWR
RNYTQFRKDL QPLMARLDLM WQFLVQGIMG LRPGGDKIAK SESMLRSIAD LPTPEAILQR
AGELPPVCRR MFTSGALKNR EFMIGKNKDL DTLRELFKRW QEGLLCSIAV TGPDGSGKTS
LVNCFQSELG TQWPVLRFSI DSRLTNEPQL LEACRQWLEL AEPPADLDAV EAYLNNLPRG
VIIVENLHNL LLRTVGGLDV ARAFLRLVLA SRHRQLWVVT VRKYPWHRMR YLLTMDRYFT
HQVHTLFNSQ SEIRDALLLR VHTSSYPVTF LNGQEEAISQ KPATGKDEQT SRQDRFFADL
FAATRGNMQA ALYYWLMNLE YDEQQQTLLV SPMGKIDYGP LRSLDRAQLY ALAEVIAHGG
LSISEHATIF GGSSLQSRML LDHLAQLNLL QYPHEQNPTA AYQLNPLFFA PITSLLESRN
IIQ
|
|---|
| |