| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2510 |
|---|
| Symbol | |
|---|
| ID | 3725212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2951655 |
|---|
| End bp | 2952806 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637752120 |
|---|
| Product | 1,3-propanediol dehydrogenase |
|---|
| Protein accession | YP_357918 |
|---|
| Protein GI | 77920103 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 2.4448e-18 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACT TTTTGTGTCC CGCGGTAAAC TTCATTGGTG CCGGTACTGT AGCTGAAACA
GGTCCCAGGG CTGCGATGTT TGGTACCAAG GCGCTCATTG TCTGTGACGG TTTTCTTGCC
AAGCTCGAGG GCGGTCCCGT TTCCAAAGTA AAAGATACTC TGACCTCATC GGGGGTTGAA
TTCGCGGTTT ACGATGGTGT CGAGCCTAAT CCCAAGGATA CCAATGTCGC TGCCGGTCTG
AAAATCTACA AATCCGAAAA CTGCGATCTG ATCGTTACCG TTGGCGGTGG CAGCTCTCAT
GACTGCGGCA AGGGTATTGG CATTGCTGCA ACGCATGAGG GCGATCTTTA TGAAGACTAT
GCCGGAATTG AGACGCTGAC CAATGAGTTG CCGCCCATTA TCGCGGTGAA CACGACCGCA
GGTACTGCCA GTGAAGTTAC TCGCCACTGT GTCATCACCA ATACCGCCAA GAAGGTCAAG
TTTGTTATCG TGAGCTGGCG CAATCTGCCC AAAGTATCTA TCAATGATCC CGAGTTGATG
GTAGCCAAGC CAGCCGGGCT TACCGCAGCC ACCGGCATGG ATGCTCTTAC CCACGCTGTT
GAGTGTTACG TGACCAAAGA TGCCAATCCG GCTACCGACG CCGTGGCTAT TCACGCCATA
AAGCTGATCG GCAAATACCT GCGTCGGGCT GTGGCCAACG GCGAAGATCT CGAAGCCCGC
GAAGGCATGG CTTACGGTTC CCTGCTCGCC GGGATGGCCT TCAACAACGC TGGCCTCGGC
TACGTTCACG CCATGGCTCA TCAGTTGGGC GGCCTGCTTG ACATGCCTCA CGGCATCGCC
AACGCCGTTC TGCTGCCGCA CATCGAACGC TACAATCTGA TGGTCAACCC CGAGAAATTC
GCCGATATTG CTGAAGCTAT GGGCGAAAAT ATCGACGGCC TCGGCAAGAT GGAAGCTGCT
GAAAAAGCCA TCGATGCCAT CGTGCGCTTG TCCATCGACG TTGGCATCCC TCAGCATCTT
GCTGATCTGG GCGTCAAGGA GTCCGACCTC GAGCCGATGG CCAAGCTGGC CATGCAGGAT
GGCAACGCAG GTACCAACCC GCGTGTCGGT AAGGTCGAAG ACATTATCCA ACTGTTCAAG
AACGCCATGT AA
|
|---|
| Protein sequence | MADFLCPAVN FIGAGTVAET GPRAAMFGTK ALIVCDGFLA KLEGGPVSKV KDTLTSSGVE
FAVYDGVEPN PKDTNVAAGL KIYKSENCDL IVTVGGGSSH DCGKGIGIAA THEGDLYEDY
AGIETLTNEL PPIIAVNTTA GTASEVTRHC VITNTAKKVK FVIVSWRNLP KVSINDPELM
VAKPAGLTAA TGMDALTHAV ECYVTKDANP ATDAVAIHAI KLIGKYLRRA VANGEDLEAR
EGMAYGSLLA GMAFNNAGLG YVHAMAHQLG GLLDMPHGIA NAVLLPHIER YNLMVNPEKF
ADIAEAMGEN IDGLGKMEAA EKAIDAIVRL SIDVGIPQHL ADLGVKESDL EPMAKLAMQD
GNAGTNPRVG KVEDIIQLFK NAM
|
|---|
| |