Gene Pcar_2364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2364 
Symbol 
ID3725066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2778779 
End bp2780887 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content56% 
IMG OID637751975 
Productputative methyl-accepting chemotaxis protein (MCP) 
Protein accessionYP_357773 
Protein GI77919958 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAC TTAATCTTCG AGGCAAGTTG TTGTTACCCA GTTTTTCCGT GATTTTGCTT 
GGTATGGCCC TGACCGGATG GCTGTCTTTT GGTGCCGCCA AGTCAGCACT GGAGGATCTT
ATCCAGGCGC AAATCACCCA GGTTTCGTCC GGTTTGGGGA CACAGGTCGA CGGCTTTGTG
GAAGAGGTCA CCGGCGCCGT GACCATGATG AGCAAACGTC AGGTCACACT CGATCTGTTT
GCTCAGCGCG GCGGTGGTTC TTTAAATGCA ACCGCCGGCG CAAACAAAGC GCTGCGGCAG
ATGTTCGATG ATCTGGATCG CTTTTATTTG GTGGCGGTAA CCGGAGCCGA CGGGACCGTG
GTCGCAGCTT CGGATTCGAC TGTGGTCGGA CATATGGATC TGTCGCAGCG TCAGTATTTT
CGGGAGGCCA TGACCGGACG GACCGCCATT TCCAATGTGA TTCGGGATAA ATCGAATGGC
AAACCGACCT TCGTGGTTGC GGTGCCGGTC GTTGTCGAGG GCCGTACCGT CGGCATCTGT
CTCGGTTCCG TAGATCTGGA ACGATTTAAC AAGAACTATA TCGACCCGAT TCAAATCGGT
AAGCTTGGCT ATGCCTACAT GGTGGATGGA AGGGGCACCT TTATCGCGCA CCCCGTAGCG
GAAAATATCC TGGACAAAGG CATTTCCGAA TATACGTGGG GTAAGAACCT GCTGGGCAAC
GAGCGGGGTG TGCAAAAGTA TCAGTGGCTG GGCAAAGAAA AAATGGTGGC GTACCAGCGG
GTGGGGAAAA CCGGCTGGGT CGTGGCGGCC GGTGCCGAAA TGGCCGATAT CTTCGCTCCT
GTCGCGCACA TCCGTAATCT CACCATCATG GTGACTCTAT TGACTTTGCT GGCCGTGGGT
GCGGTTATTT ATATGATCGC ACGTTCCATT GTCAATGCGC TGCAGCTTGG CGTCCTTTTT
GCCGAAGATA TTACAGCCGG CGATGTCTCC CGGCGGCTTG ACCTGGATCG CGATGACGAA
ATCGGTGTAC TGACCACGGC TCTTGATCGC ATGGCCGATG GTCTGGAAAA TAAGGCCGGT
CTGGCCGAAC AGATCGCTTC GGGCAATCTG GCCGTCGATG TGACGTTGGC CTCGGATCGC
GATCGCCTCG GCAAGGCGCT GGTGACCATG ACCGACAGTC TAAACGACCT GGTATCCCAG
GTTCAGTCGG CCGGCGAACA GATCGCTGCC GGCTCGGGGC AGGTCGCCGA CAGCAGCCAG
AGTTTATCCC AGGGGGCGAC AGAGTCGGCG TCCTCCCTTG AAGAGGTCAC GGCTTCCATG
GTCGAGCTCG GTTCTCAAAC CCGGTTCAAT GCCGACAATG CGACCAAAGC CAATCAACTC
GCGGCCCATG CCCGAGATGC CGCGGAAAAA GGCAATCAGC AAATGGCGCA GATGGTGACC
GCCATGGAAG ACATCAATGC TTCCGGACAG AATATTTCCA AGATTATCAA GGTGATCGAC
GAAATCGCTT TTCAAACCAA TCTGTTGGCG CTCAATGCAG CTGTCGAGGC GGCACGTGCC
GGTCAGCACG GTAAAGGTTT TGCCGTGGTC GCCGAGGAAG TACGCAGTCT GGCGGCTCGC
AGTGCCACAG CTGCCCGAGA GACCGCAGAT CTGATTGAAG GTTCGGTGGG CAAGACACAA
AACGGCAAAC ATATCGCCGA CGAAACGGCG ACTGCCTTGA AGGGGATCGT CGACGGGGTT
TCCACGGTCA CCGACCTGAT TAGCGAGATT GCCGCGGCTT CCAATGAACA GGCCGCCGGT
ATCGAACAGA TAAATCAGGG ATTGGGGCAG ATCGATCAGG TGACCCAGCA GAATACCGCC
AATGCCGAGG AGAGTGCGGC TGCCGCCGAA GAGTTGGCCG GCCAGGCGGA CCAGATGCGC
ATCATGCTTG CCCGCTTTAC CGTTCGGCAG GCAGGTGGCC AGATGGTTGT GCAAGCTTCT
CCCAAGGCGC TGCCTGAAAT CAAGAAAAGC TCCAAACCTG AGGAACAACC GGCGTTGCCG
GCCCCTTCTG CCAAAACCAA GCCCGAAGAG GTGATCGCTC TGGATGATAG TGACTTCGGG
AAATATTGA
 
Protein sequence
MMKLNLRGKL LLPSFSVILL GMALTGWLSF GAAKSALEDL IQAQITQVSS GLGTQVDGFV 
EEVTGAVTMM SKRQVTLDLF AQRGGGSLNA TAGANKALRQ MFDDLDRFYL VAVTGADGTV
VAASDSTVVG HMDLSQRQYF REAMTGRTAI SNVIRDKSNG KPTFVVAVPV VVEGRTVGIC
LGSVDLERFN KNYIDPIQIG KLGYAYMVDG RGTFIAHPVA ENILDKGISE YTWGKNLLGN
ERGVQKYQWL GKEKMVAYQR VGKTGWVVAA GAEMADIFAP VAHIRNLTIM VTLLTLLAVG
AVIYMIARSI VNALQLGVLF AEDITAGDVS RRLDLDRDDE IGVLTTALDR MADGLENKAG
LAEQIASGNL AVDVTLASDR DRLGKALVTM TDSLNDLVSQ VQSAGEQIAA GSGQVADSSQ
SLSQGATESA SSLEEVTASM VELGSQTRFN ADNATKANQL AAHARDAAEK GNQQMAQMVT
AMEDINASGQ NISKIIKVID EIAFQTNLLA LNAAVEAARA GQHGKGFAVV AEEVRSLAAR
SATAARETAD LIEGSVGKTQ NGKHIADETA TALKGIVDGV STVTDLISEI AAASNEQAAG
IEQINQGLGQ IDQVTQQNTA NAEESAAAAE ELAGQADQMR IMLARFTVRQ AGGQMVVQAS
PKALPEIKKS SKPEEQPALP APSAKTKPEE VIALDDSDFG KY