Gene Pcar_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2358 
Symbol 
ID3725060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2769748 
End bp2773056 
Gene Length3309 bp 
Protein Length1102 aa 
Translation table11 
GC content56% 
IMG OID637751969 
Producthypothetical protein 
Protein accessionYP_357767 
Protein GI77919952 
COG category[S] Function unknown 
COG ID[COG3164] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCAA AAGAAACGAC CAAAACTTCG ATATTCCGGC GGCACCCATT CTTGACGGCT 
GTCAGCCTGC TGGCTGCGGC CGGACTTACG GCGGCAAGCC TGTTCCTGAT GACCTTTGAC
CTGAATGCTT ATCGGGAATC GCTGGCAAAC CGGTTAAGTA TCGCATTGGA CCAACCTGTT
TCCATTGGTT CGGCGCATAT GTCATGGCGC CAGGGCCCCG CCTTCAACAT TAGGGATATT
CGCATCGGGG AGCCCCTCAC GGAATCCGGT GGCGACATTG CCCATCTGTT TTTGCATCCG
CGCCTGTTGC CGTTGTTGAT GGGAAAAGTT GTCTTTGACG ACATGATTAT CGAACGTCCG
ATTTATCATG CGCGTCTTTT ATCATCCAGC TCGGATACCG GCACCGACTT GCCGACGATA
CCGCTGAGAG CCCTGCTGCA AACCATACAG GTACATAACC TGACGATTAT CGACGGGCAA
CTCCGTCTCG AAAACGCCCA AGACGACCGG CATCCCCTGG CGCCACTGCA GATCAATGCC
ATCAACCTGA ACGTACGCAA TCTGCTGACC GGCCGGCCCG GCAAGCTTAA CATCCACGCC
GAACTGCCCC AAAAAGAAGG GCTCGCCACA CTGGACGTCA AGGGCAAAAC AACCTTCGAC
ACCAACCTGG GCAACTGGCG ACAGATCAAA GGTCAACTGC GGTTGCAGAT GGAAAACATC
GCCACGGAAC AACTTCGCAG CTGGCTGTCC CTGCCGGAAG CGACACCCGC ATTGAGCGGC
CGGGCATCCC TTGAGCTAAA CGCCGATGGA AGCGCTGCCA GCGGTTTACA CTTCAGCGCC
AGCCTATCCG GCAAGAACCT GCAACTTGCC TGGCCTGGAC GTTATGCCAA GCCCCCTGCG
GTTAAAAAAG TCACTGTCAG CGGCACCTGG GTTGCCGCTC AAAACATCAA CAGAGTGACC
GACCTGGATC TCTATCTGGA CACCCTGAAC ATACGCGGCC ACTTTTCTTT GCAGCGGGAC
AAAGAGCAAC CCTGGCTGGA AGGGACACTG GCCTGCTCTC CCTTGCAACT GTCCGACATC
CGACGTTTTC TCCCCGACCG GATCCGACTT TCCGAACAGG CCCTGCTCCA TACCAACCTG
GATCGGGGCA CAGTGCAGAT CCATGATTTG CGCTTCGCCG GGCCTTTGTC CCACTTCAAA
CAGGCAGGCG CTCCGCTTCC GATCACCCAT ACCCGCACCA CCCTCAGCGA TGCCCGTCTT
CAATTGCCAT CGTTCCCGGC ATTGGAACAG GTAAACTGCA CCCTGACGCT CACGGAGGGT
CTGCTGCACC TTAGCCAGGG CAAGGCAACG CTCCTACAAC AGCCCGTCCG GTTCAATGCA
ACCACCGAGC ACCTGCTGCA GGATGACATG AGCATGTCTT TCAGCGCCGA CTGGGACGCC
CCGGCACAGG CGTTATGGCA AGGACTGCCC GGCACCGACA AACTGAGCGG CAAAGCCGGC
GGCGTCATAC CGGTCAGTTT GTCGCTCAAC GGTGCGCCCG GAAACTTCCG TACCACGATG
CAAGCCAGCC TTGCCGGCTG CGCTCTCGAG GTACCGGGCA TCCTATCCAA AAAAGCGGGC
AGTCCCGGGG ATCTTCGCGT CTCGGGACAT CAGCAGAAAA ATCGGTGGAT CCTCGATCAG
GGACAGTTCA ACCTTGTTCC TTTTCGTCTG AACTTTTCCG GGCAACTGGA CATGGGCCAT
CAGAACCCCC TCGCACTGCA ATGGGAATTA AGTCCAACGG ATCTGCAGGA AGCCGGAAAA
CTGATACCGG CCTTGTCCAC CTATCACACC ACCGGGACCC TGGGGCTGAC GGGACAACTG
ACCGGCCCTC TTGCAACACC GGAGTTTTCC GGACAAGCCC GCTTGACCGA TGCGGGCTTC
GCATTGGATA GCATCGAAGC CGACGTGAAG GCCATTAACG GCAGCATCAG CATAAAAAAT
CAAGAATGCC ATTTTACCGG CGTCAAAGCC CGACTCGGCC AATCGGCAGT CACCCTGGAG
GGAAAACTTA CCGGAATTTC CGATCCCATC TTCAGGTTAC GTGTCCGGGC ACCGCAAATC
CGTGCCGAAG AGCTGATCTT TCCGGGCAGC CACGTAGTCT TTCACAACAT GGATGGCAGC
ATGACTTTCA ACCACGATGC CATCCGTTAC CAAAACATCC GATTCGATCT GCAAGACAGC
AGAAAACTGC ACCTGGACGG TATCCAGAGA CATACGCACC CAACCACTGT AGAACTTGAC
ATCCATGCGG AACAAGCCTC CATCGACGAA GTTCTGGCGC TGTGGGAAAA GGACTCTGCG
TCACCGCCTG AAGCCACGAA TGAAGAGACA GACCATAACG CTGTCCTGAA AATACGTGCT
GCCGTCGACA AAGGCCATTA TGGTCCTCTG ATCTTTTCCG ATGCCACAGG ACTCATCGCT
GCGCAGGACA ACGTGGTTAC CATCAAACCG CTGAACTTCC GCGCCGCTTC CGGATCTGCC
CAGGCTGAGA TCATTATCGA CAACAACCAT GAACAGCTGT CGATGTTGAA TATCGCCGCC
GAGTTGAACG ACATGGACGC GGCGCATCTT CACAACCAAT GGTTTCGGCA CCCAGGCTTG
ATAACTGGCA AACTCAGTGG CCGCCTGCAA CTGCAGGGAC CAGCCGGCCC CGATCTGCTG
TCCCAAGGCA CGGGACAAGC CAACATCCGT ATAAAAGACG GCGTGTTGCA TAAATTCTCT
TTTCTCTCCA AGGTTTTTTC CCTGCTTAAC ATCTCGCAGC TCTTCAACTT GCACCTGCCG
GATATGGCCA GTAAGGGCAT GCCGTTCAAC GTTTTGGATG GTTCCCTGCA ACTGCAGGAT
GGGATACTCT CCAGCGAGGA TCTGACCGTA GCAAGCAACG CCATGGACTT GTCGCTGGTG
GGGTCTTATG ATTTACCGCA GGATGATCTC GACCTGTTGA TGGGCGTCAA GCCTTTTGGC
ACGGTCGACA AGGTCGTATC CAAAATTCCA CTGGCCGGGT GGATCCTCAC CGGTGACAAC
AAGGCCCTGA TCACCGCGCA CTTTCAGATA CGCGGCCCGA GCGCCGAACC CGAGGTGAAA
GCGATCCCCG TCACCTCGGT TTCAAAAAAG GTTCTGGGTA TTTTTCAGCG GGTATTGGGG
CTACCGGGCA AGGTCGTCAG CGATGTGGGA AAACTGTTTC AAGGGGAGGA AAAAGCAAAG
GATGAGGCGG ATCAATCAAC AACGGAGCTG GAGAATCAGT CACCCGGCAA AGAACGACAA
CCGCTGTAA
 
Protein sequence
MTPKETTKTS IFRRHPFLTA VSLLAAAGLT AASLFLMTFD LNAYRESLAN RLSIALDQPV 
SIGSAHMSWR QGPAFNIRDI RIGEPLTESG GDIAHLFLHP RLLPLLMGKV VFDDMIIERP
IYHARLLSSS SDTGTDLPTI PLRALLQTIQ VHNLTIIDGQ LRLENAQDDR HPLAPLQINA
INLNVRNLLT GRPGKLNIHA ELPQKEGLAT LDVKGKTTFD TNLGNWRQIK GQLRLQMENI
ATEQLRSWLS LPEATPALSG RASLELNADG SAASGLHFSA SLSGKNLQLA WPGRYAKPPA
VKKVTVSGTW VAAQNINRVT DLDLYLDTLN IRGHFSLQRD KEQPWLEGTL ACSPLQLSDI
RRFLPDRIRL SEQALLHTNL DRGTVQIHDL RFAGPLSHFK QAGAPLPITH TRTTLSDARL
QLPSFPALEQ VNCTLTLTEG LLHLSQGKAT LLQQPVRFNA TTEHLLQDDM SMSFSADWDA
PAQALWQGLP GTDKLSGKAG GVIPVSLSLN GAPGNFRTTM QASLAGCALE VPGILSKKAG
SPGDLRVSGH QQKNRWILDQ GQFNLVPFRL NFSGQLDMGH QNPLALQWEL SPTDLQEAGK
LIPALSTYHT TGTLGLTGQL TGPLATPEFS GQARLTDAGF ALDSIEADVK AINGSISIKN
QECHFTGVKA RLGQSAVTLE GKLTGISDPI FRLRVRAPQI RAEELIFPGS HVVFHNMDGS
MTFNHDAIRY QNIRFDLQDS RKLHLDGIQR HTHPTTVELD IHAEQASIDE VLALWEKDSA
SPPEATNEET DHNAVLKIRA AVDKGHYGPL IFSDATGLIA AQDNVVTIKP LNFRAASGSA
QAEIIIDNNH EQLSMLNIAA ELNDMDAAHL HNQWFRHPGL ITGKLSGRLQ LQGPAGPDLL
SQGTGQANIR IKDGVLHKFS FLSKVFSLLN ISQLFNLHLP DMASKGMPFN VLDGSLQLQD
GILSSEDLTV ASNAMDLSLV GSYDLPQDDL DLLMGVKPFG TVDKVVSKIP LAGWILTGDN
KALITAHFQI RGPSAEPEVK AIPVTSVSKK VLGIFQRVLG LPGKVVSDVG KLFQGEEKAK
DEADQSTTEL ENQSPGKERQ PL