| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2357 |
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| Symbol | |
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| ID | 3725059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2768861 |
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| End bp | 2769751 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637751968 |
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| Product | 23S RNA-specific pseudouridylate synthase |
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| Protein accession | YP_357766 |
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| Protein GI | 77919951 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 76 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATAA TTACCCTCAC TGAACAGGAC GCGGGACAAA CCGTTCTGGA GACCCTTCAT
GCGCGCATAC CAGCGGCGCC ACGCTCCTAC CTGCGCCAAT TGCTGCGTAG CGGCAAAATT
CGCTGCAACG GATCAATCCT GACCGAAAAC ATCTGTCTGC GGGGCCATGA AAGCCTGCAG
CTTCCCGATA GCAAACGCCT GCGGGAGGTT TGCACCGACA GAGTACCGGA ACTGACCATA
TTGCTGGAAA CCGACGAGTT TCTGGCTGTC TTCAAACCTG CCGGACTCGC CGTGCACAGC
AGTGTCGGGC ATACCGAAGA CAACCTTACG GACCGCCTCA AAGCCTGGAT AAAACAATGC
AAAGCCCCTT ATCGCATAGC CCCGGTCCAT CGACTGGATA TCGGCACATC AGGTCCGGTG
ATCTTCGGCA AAGGCCGCAA AGCCACCGCC GAGCTGGGGC GGTTGCTGCA AAACGGACAC
ATGAGCAAAA CCTACCTGGC ACTGGTTAAC GGCCATCCCC CGGAGACGGG GATGATGGTT
ACCTCGGTGC GTGTCCAGGG AAAACCCAAA CAGGCAGCTA CGCGCTTTCG TGTGCTCGGC
CGCCACGCCA GCGCCGCCTT GCTCGAACTT GAACTCCTGA GCGGCCGCAA GCATCAGATC
CGCCAACAAT GCGCCGATGC CGGTTGGCCG CTGTATGGCG ACCACCGCTA TGGCGGTCCG
GAGCTCCCTG GTCGGGATCG GCTGTTCCTG CACTGCTGGC AGCTGGCCTG GCCCATACAG
GGCGATCAGC CATCCCACAG GATAACCAGT CCCCTTCCGG AAGAACTGTC CGTTATCCTC
ACCAGCATGG ATATTGAATC TCCAGCACCA AACCGGAAAC CCGAATCATG A
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| Protein sequence | MAIITLTEQD AGQTVLETLH ARIPAAPRSY LRQLLRSGKI RCNGSILTEN ICLRGHESLQ
LPDSKRLREV CTDRVPELTI LLETDEFLAV FKPAGLAVHS SVGHTEDNLT DRLKAWIKQC
KAPYRIAPVH RLDIGTSGPV IFGKGRKATA ELGRLLQNGH MSKTYLALVN GHPPETGMMV
TSVRVQGKPK QAATRFRVLG RHASAALLEL ELLSGRKHQI RQQCADAGWP LYGDHRYGGP
ELPGRDRLFL HCWQLAWPIQ GDQPSHRITS PLPEELSVIL TSMDIESPAP NRKPES
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