| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2301 |
|---|
| Symbol | |
|---|
| ID | 3724993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2683854 |
|---|
| End bp | 2684864 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637751902 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_357710 |
|---|
| Protein GI | 77919895 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTTA CTCATCAATA CGTTGAACGG GAAACCGGGA ATGTGCGCAC CGAACAGCTG
TTCGGCGATC GCCTGGTGCG ATTTCTCTAT CATCCGCTGC GAGAGCACGC TCACTGGCTG
TTCCGCGCCT TTACCGGAGG GCGTTGTTCG GCGGCGCTGG CCCTGTTCAA CTACGATTTA
GCCCTCGGCT GCCGGGTACT GGGCAATCGC GGTTTTCTGC AGGAGTCCGG GCTCGATCTG
AGGGAGTGTC TCGACCCGGT CGAACAGCTG GATACGGCCC GCAAAGTCTT CGAGCGCAAG
ATCCGCTACT GGGAGTGCCG ACCTGTATCG GATGAGCCGC GTGCGGTCCT TTCCCCCGCC
GATGCGCGCA TGTTGGTCGG TTCATTTCGC GAGAATGGTC AGCTGTTTCT CAAAGACAAG
TTTTTCGATT TCGAGGAACT GCTGGGACGC GACCGGATAC GCTGGCAAAA GGTATTTGCC
GGCGGCGATT ACGCCATTTT TCGCCTGACG CCCGACAAGT ACCACTATAA CCACACGCCG
GTATGTGGTC GCGTCATCGA TTTTTACGAA CTGGACGGCG TTTTCCATAG CTGCAATCCG
CAGGCGGTGG TGCAGGCGGT GACGCCCTAT TCCAAAAATC GCCGTGTGGT GACGGTGTTC
GATACCGATG TGCCCGGTGG CACCGGTGTC GGCCTGGTTG CCATGATCGA GGTGGTGGCT
CTGATGATCG GCGAAGTGGT GCAGTGCTAC AGCGATCATG CCTACAACGA TCCGATACCG
GTGCGCTCCG GCCTGAGCGT GACGCGCGGA CGGCCCAAAA GCCTGTTCAG GCCCGGCAGC
AGCACCGACG TGCTGATCTT CGAAACCGGT CGGGTGCGGT TTGACGAAGA CCTGCTGCGC
AATCAAGGCC GTTGCCAGGT ATCGAGTCGT TTTTCTCAGG GATTCGGGCG TTCGCTGGTG
GAAACCGAAG TGCAGGTGCG CTCTCGCATC GCCATGCCGG CGGACGTTTA A
|
|---|
| Protein sequence | MAVTHQYVER ETGNVRTEQL FGDRLVRFLY HPLREHAHWL FRAFTGGRCS AALALFNYDL
ALGCRVLGNR GFLQESGLDL RECLDPVEQL DTARKVFERK IRYWECRPVS DEPRAVLSPA
DARMLVGSFR ENGQLFLKDK FFDFEELLGR DRIRWQKVFA GGDYAIFRLT PDKYHYNHTP
VCGRVIDFYE LDGVFHSCNP QAVVQAVTPY SKNRRVVTVF DTDVPGGTGV GLVAMIEVVA
LMIGEVVQCY SDHAYNDPIP VRSGLSVTRG RPKSLFRPGS STDVLIFETG RVRFDEDLLR
NQGRCQVSSR FSQGFGRSLV ETEVQVRSRI AMPADV
|
|---|
| |