| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2296 |
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| Symbol | |
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| ID | 3724988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2678340 |
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| End bp | 2679929 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637751897 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_357705 |
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| Protein GI | 77919890 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 80 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCATC GGTTACTCAA TATCTTTATT GTTTCACAGG ATTCTCAAAT TGAAACGCTT
CTCCAAGGGG TGCAACCCGA GGAAAGGTTT TCCCATCGGT TTCTTTGCTC ACCCAATATT
GATGAAACCG ACTTGAACGA CTATGCGATC ATTGTCCTCG ATTTTCAAAC CGTTGCAGCA
GAATCCCTGG AGCCTATTAA GTCAATCAAA GCAGACCGGG TTGTCGTGAT AGGTTGCTTT
ACTTCCGATA GCTTTCCTGT TCTGGCAGAG AATTACCACC TCTTTGACCA GGTCTGGGTC
AAGCCTTTTG CCGAAGATAA AGTCCAGGCC TCCTTCGCCG GGATTTTAAG GCATCTCAAA
GAACGGGACG AGACCATCCT TGGCCAAAAA TATCTGGATA CCCTGATAGA CAGTCTGCCC
GATCTGATTT GGTTCAAAGA TGCACGGGGG GCCCACCTGA AAGTCAACGA CAGTTTCTGC
CGTACCGTCA ATAAGACCAA GGCTCAGATA GAAGGCCGCG GGCATTATTA CATCTGGGAT
CTTGAACCTG ATGAATACGC CCAGGGGGAA TATATTTGCC TGGAGTCTGA AGAGATTGTC
CTCAACAAGA AGGAAACCTG CCTGTTTGAT GAAACGGTGA AATGCGGCGA TGAACTTCGA
AAGTTCAAAA CCTATAAATC ACCGATCTTT GACACCGATG GCGAGGTTAT CGGCACGGTT
GGGTTCGCCC ACGATGTGAC CGACCTGCAG AACTTGCTGA TCGAGTTGAA TATTTTGATT
GAGGGGCTGC CTTTTGCCGT CATGGTGACC GACAAAGACA GGAATATTAC GAGTGTCAAC
CAAAAATGTA TCGACATCTT CTCTCTTGAT CGCACCGAGT TTGTCGGCGA AAAAGTCGAT
TTTTTGATCG ATGAATCCAA ATCATTCACT CGCAGTAAAA AATGGATTAT CGAAAAAGAA
AAAGAAGGGA CGTTGCTCCT TTCAAAGAAT AAAGTTCTGA AAATCCATGA TGAAAAGCTA
CTGGATACTT TTGGCGTACT GGCCGGTCAT GTGTACCTTT TTGTGGATAT TACTCTTGAG
CACCAATACA AAAACAAACT GCTAATCGAT GCCCACACCG ATTATTTGAC CAAATTGAAT
AACAGGCGCA GTCTTCAGGA TTTTATGCGG AAAACCCCTT GTCAACCGGG TACGGCACTG
TTGCTCGTGG ATCTCGATAA CTTCAAGGAA GTCAATGATG AGCATGGTCA CGACGAAGGA
GACAGAGTGC TGATCGCCTT TTCCGACTTG CTGCAGCAGC TGTTTCCCGC TGAAAATCTC
TTTCGGCTTG GCGGCGATGA GTTTGCCATC ATTATTCCTC AGGTGAAAGG TGCGGACAGG
CCGGAACAGT GCGCCGAGCA ACTGCTGACA GGATTTGGAG ATAAAGTTGC CCGGAAGTTC
CCGCATACCA AAATTTCTGT CAGTATCGGG ATTGCCATGG ATGTCGATGA TGGGGACTTC
GGAGAATTGT TCAAAAAAGC GGATATGGCG CTGTATGACT CAAAAAAAGC GGGAAAAAGT
GCCTTCACCC TTGGAGCAAA TAGCCTGTGA
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| Protein sequence | MYHRLLNIFI VSQDSQIETL LQGVQPEERF SHRFLCSPNI DETDLNDYAI IVLDFQTVAA
ESLEPIKSIK ADRVVVIGCF TSDSFPVLAE NYHLFDQVWV KPFAEDKVQA SFAGILRHLK
ERDETILGQK YLDTLIDSLP DLIWFKDARG AHLKVNDSFC RTVNKTKAQI EGRGHYYIWD
LEPDEYAQGE YICLESEEIV LNKKETCLFD ETVKCGDELR KFKTYKSPIF DTDGEVIGTV
GFAHDVTDLQ NLLIELNILI EGLPFAVMVT DKDRNITSVN QKCIDIFSLD RTEFVGEKVD
FLIDESKSFT RSKKWIIEKE KEGTLLLSKN KVLKIHDEKL LDTFGVLAGH VYLFVDITLE
HQYKNKLLID AHTDYLTKLN NRRSLQDFMR KTPCQPGTAL LLVDLDNFKE VNDEHGHDEG
DRVLIAFSDL LQQLFPAENL FRLGGDEFAI IIPQVKGADR PEQCAEQLLT GFGDKVARKF
PHTKISVSIG IAMDVDDGDF GELFKKADMA LYDSKKAGKS AFTLGANSL
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