| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2260 |
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| Symbol | clpA |
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| ID | 3724952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2638671 |
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| End bp | 2640929 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637751861 |
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| Product | ATP-binding component of serine protease |
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| Protein accession | YP_357669 |
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| Protein GI | 77919854 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000000277192 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGCAC AGGAAGTACA GATAACCTTT TCACTTGCTG TTCGGGAGGC GCAGCGCCGC
CGCCACGAAT ATCTGACCAC TGAGCATATT CTCTATGCCA TGCTGCTCGA GGAACATGGC
AAGGAATTGA TTGTTGCCTG TGGGGGGGAT ACCGAAGCGC TTAAGGGTCA ATTGGAAACC
TATTTCACCG AACGCCTCGA AAGCCTGGTT GAGGATACCG ACAATGTTCC CGAACAAACC
GTCGGTTTGC AGCGGGTATT GCAGCGGGCG GTGTTGCATC TGCATTCCGC CGGGAAAAAA
GAGATCACCA TCGGCGATCT GCTGGCGGCC ATGTTTGCCG AAAAAAACAC CCATGCGGTC
CATTTTCTCG AGGAACAGGG CGTCTCCCGC CTCGATGTGC TCAACTATAT TTCTCACGGT
GTGACCAGGG TCTCCCGCCA GGGGGACGAT TCCCAGCCGC ATACGCCGTC CCAGCCCGGT
GGCGGCAGTG ACGACAAGGC CAATCCGGAG CGCGAGAAAA CCAAGCAGGA TCCGTTGACC
CTGTTTACGG TCGATCTGGT GGAGAGGGCT CGTCAAGGTC GCATCGATCC TCTTATCGGC
CGGGACGCCG AACTTGAGCG TACCGTTCAG GTGTTGTGTC GCCGTCGCAA AAACAATCCC
CTGTTCGTTG GGGAGGCGGG CGTCGGGAAA ACCGCCATGG CCGAGGGTTT GGCGTTGATG
ATCAGTCAGG GCCAGGTGCC GGAGATTCTC AGCCGGTGCG AAATTTTTGC TTTGGATATG
GGGACATTGC TGGCCGGCAC CAAGTTTCGC GGCGATTTTG AAGAACGCCT CAAGTCCGTT
ATCAAAGCGC TGGAAACCCA CCCGGACTCG ATCCTGTTTA TCGATGAGAT CCATACCGTG
GTCGGAGCTG GTGCCACCAG CGGCGGTTCG CTTGATGCAT CCAATATCCT CAAACCGGTG
CTTGCCAGTG GTGATTTCCG CTGTATTGGG TCGACCACCT ACGAGGAGTA CAAAAATCTG
TTCGACAAGG ATCGGGCTCT GTCGCGACGT TTCCAGAAAA TCGATATCGT CGAGCCCAGC
GTCGAGGAAA CTGTCGATAT TCTCCAGGGG CTCAAAGATC GCTACGAGGA ACATCATGGC
GTGAGCTTCA CCGACGAGGC CATAACCGCA GCGGCTCAGC TGTCCGCCCG TCATATTAAT
TTCCGTCACC TCCCGGACAA GGCCATCGAT GTCCTCGATG AAGCCGGTGC CGCCATGCGT
CTTGCCGGTG GTCGTGTGGT GCATTTGGAC GATGTCGAAC GCGTGGTTGC GGGCATTGCC
CGCATTCCGG AGCGCAGTGT CTCAACCTCC GATCGCCGGC GGCTGAAAAC CCTGGGGCGG
GATCTTAAGC GTCAGGTGTT CGGTCAGGAT CAGGCGGTTG ACGCCCTGGC CCGTTCGGTA
CTCCGGGCAC GCGCCGGGTT GGGGCATCCC GATAAGCCGA CCGGTTCGTT TCTGTTTACC
GGGCCGACCG GCGTCGGCAA GACCGAAGCG GCGCGCCAGT TGGCGTTGCA GCTCGGGGTT
GAATTCATTC GCTTCGATAT GAGCGAATAC ATGGAAAAAC ACTCGGTGTC GCGCCTTATC
GGTGCGCCTC CCGGTTACGT CGGTTTTGAC CAGGGTGGTC TGCTTACCGA TGCGGTGACC
AAACAGCCCT ATGCCGTACT GTTGCTCGAT GAAATCGAAA AAGCGCATCC GGACTTGTTC
AGTATTCTGT TGCAGATCAT GGATCACGGC AGCCTGACGG ATAACAACGG CAAAAAGGCC
GATTTCCGTA ATGTTGTGCT GATCATGACC AGCAATGTCG GAGCGCGGGA GATGAGTGCC
AATCCCATCG GCTTCGGCAA GGAGGGGGAG ACGGTTCCGC GCCAGGCCGT TGAACGAACC
TTTGCTCCGG AATTCCGCAA TCGTCTCGAT GCCATTATCC CTTTCCATGG CTTGGGTGAA
CAGACCATGC TCAAGATTGT GGATAAGTTT CTCGATCAAT TGCGCGAGCG GTTGGCCGAG
CGCCAGATTA CCCTGGTGGT ATCCAGCGCT GCCCGGGCAG ACCTGGCCCG CCGTGGCTAT
GATCCGCGCT TTGGTGCACG TCCCCTGTCG CGTCTGATCC AGGCTGAAGT CAGCGATGTT
ATCGCCCAGG AAATCCTGTT TGGTGCTTTG CAGTCCGGTG GCGAAGTCCG TATCGGGTGC
CGTGCCGGGA AACTGACCTT CCGTTTTTCC GCAGAGTAA
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| Protein sequence | MFAQEVQITF SLAVREAQRR RHEYLTTEHI LYAMLLEEHG KELIVACGGD TEALKGQLET
YFTERLESLV EDTDNVPEQT VGLQRVLQRA VLHLHSAGKK EITIGDLLAA MFAEKNTHAV
HFLEEQGVSR LDVLNYISHG VTRVSRQGDD SQPHTPSQPG GGSDDKANPE REKTKQDPLT
LFTVDLVERA RQGRIDPLIG RDAELERTVQ VLCRRRKNNP LFVGEAGVGK TAMAEGLALM
ISQGQVPEIL SRCEIFALDM GTLLAGTKFR GDFEERLKSV IKALETHPDS ILFIDEIHTV
VGAGATSGGS LDASNILKPV LASGDFRCIG STTYEEYKNL FDKDRALSRR FQKIDIVEPS
VEETVDILQG LKDRYEEHHG VSFTDEAITA AAQLSARHIN FRHLPDKAID VLDEAGAAMR
LAGGRVVHLD DVERVVAGIA RIPERSVSTS DRRRLKTLGR DLKRQVFGQD QAVDALARSV
LRARAGLGHP DKPTGSFLFT GPTGVGKTEA ARQLALQLGV EFIRFDMSEY MEKHSVSRLI
GAPPGYVGFD QGGLLTDAVT KQPYAVLLLD EIEKAHPDLF SILLQIMDHG SLTDNNGKKA
DFRNVVLIMT SNVGAREMSA NPIGFGKEGE TVPRQAVERT FAPEFRNRLD AIIPFHGLGE
QTMLKIVDKF LDQLRERLAE RQITLVVSSA ARADLARRGY DPRFGARPLS RLIQAEVSDV
IAQEILFGAL QSGGEVRIGC RAGKLTFRFS AE
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