Gene Pcar_2216 details

Gene Information

• Locus tag: Pcar_2216
• Symbol: nadE
• ID: 3724928
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 2589833
• End bp: 2591791
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637751817
• Product: NAD synthetase
• Protein accession: YP_357625
• Protein GI: 77919810
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG0171] NAD synthase; [COG0388] Predicted amidohydrolase
• TIGRFAM ID: [TIGR00552] NAD+ synthetase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0000000808702
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATTC GTATGGCATC CCATGGATTT GTCAGGATCG GCGTATGTAC GCCGGCTACC 
AAGGTGGCGG ATGTTGCCTA TAACTGCGAA CAAATCCGCA AGCTGGTCGC GGAGACTCCG 
GACTGTCGTT TCTTTCTGTT TCCCGAGTTG TGTCTTACCG CCTATACCTG TGCCGACCTC 
TTTTTTCAAC CGCTGCTTGT GGATCAGGCG CGTAAGGCCA TCGTTCAGTT GGCCGAGTTT 
ACCGCTGAAC ATCGGGTGAC CATGGTGGTC GGAGCGCCGA TCGCTCATCG CGGCAGACTG 
TTCAATTGCG CGGTATTTCT GTCTGGGGGG CGGATTCTCG GGATTGTGCC TAAACGGTTT 
TTGCCCAATA CCCAGGAGTT TTACGAAGAA CGCTGGTTTT CCTCTGCTGC GGATCTGACC 
GCGACGGAGT TGATGTGGGA CGGTGAATCT ATTCCCTTTG GTAACGATCT GCTGTTTCGT 
GCCGAGGGAC TGCCCGATTG TATGATCGGT ATCGAAATTT GCGAGGATGT GTGGGTTGCC 
AATCCGCCCA GCGGGCAACT GGCTGTGGCT GGGGCCAATG TATTGTTGAA TCTTTCGGCT 
AGCCCTGAAT TGCTGGGCAA GATGGAATAT CGTCGCGCCC TGGTGCAGAA CCAGTCGGCA 
CGTTGTCTTG CCGCTTATGT CTATGCTTCC TCCGGCCCCG GTGAATCAAG TACCGATCTG 
GTGTTTTCCG GACATTCACT GATCGCGGAG AACGGTACCA TTTTGGCCGA AACGGAACGT 
TTCCGGTTTG ACAGCCAGAT CGCAGTGGCG GATGTCGATA TTGAGCGGTT GGTCAACGAA 
CGTTTCAAAA ACAACAGTTA CGGAGGGGCC CGGTCGGATG CCTCGTATCG GGTTATCGAC 
TTTCTTCTGA CCGATGTGAC TACCGAGCGA CTGCGGCGGC CTGTCGCCGC CACACCCTTT 
GTGCCGCCGG TCGAGGAAGA GCGGGCCCAT CGTTGTCATG AAATTTTCGA GATTCAGACC 
ACCGGGCTGG CCAAGCGCTT GCTGCACACC GGCGCCAAGC GTGTCGTTAT CGGCATATCC 
GGCGGTCTCG ATTCGACCCT GGCTTTGTTG GTGACGGTCA AAGCCTTCGA TAAATTGGGC 
TATGACCGTT CGGGTATCGA GACCATTACC ATGCCCGGTT TCGGAACCAC GCAACGTACC 
CGCGGCAATG CCGAACGTCT GGCGGAATTG CTTGGGACCG GATTGCGGGT GATCTCCATC 
GATGCTGCGG TGCGCCAACA CTTTGCCGAT ATCGGGCATG ACGAGACGGT GCACGATATT 
ACCTATGAAA ACTCCCAGGC CCGCGAACGT ACCCAGATCC TGATGAATGT CGCCAATCAG 
GTCGGAGGCC TGCTTATCGG CACCGGCGAT CTGTCGGAAC TGGCCCTGGG GTGGTGTACC 
TACAACGGCG ATCATATGTC CATGTATGCA GTCAATACCG GCGTACCCAA GACCCTGGTG 
CGTTACCTGG TGGCCTGGTG TGCGGATGCG GAATTCTCCG GCGATATCTC CGCCATTCTG 
CACGATGTCT GCGATACCCC CGTGTCGCCG GAATTGCTGC CTCCGCATGA AAACGGTGAA 
ATCAAGCAGC GTACCGAGGA TAAGGTTGGC CCTTATCTGC TGCACGATTT CTACCTCTAT 
CATGTGGTGC GCCTGCAGCA TCGGCCGTCG AAAATTTTTT TCCTGGCTCG TCAGGCGTTT 
GGCGATCAGT TCACCGCCAG GGAAATTCTG CATTGGTTGC AGACCTTTTA TCGGCGTTTT 
TTCTCCCAGC AGTTCAAACG CTCCTGTCTG CCCGATGGAC CTAAGGTCGG TAGCGTCGTG 
CTTTCGCCGC GCGGTGACTG GCGTATGCCC AGTGATGCCA ATGCAGCTGT GTGGCTTAAC 
GATTTGAAGC AGCTTGAAGG AGTGGTGGGT GAAGAATGA 

 

Protein sequence

MEIRMASHGF VRIGVCTPAT KVADVAYNCE QIRKLVAETP DCRFFLFPEL CLTAYTCADL 
FFQPLLVDQA RKAIVQLAEF TAEHRVTMVV GAPIAHRGRL FNCAVFLSGG RILGIVPKRF 
LPNTQEFYEE RWFSSAADLT ATELMWDGES IPFGNDLLFR AEGLPDCMIG IEICEDVWVA 
NPPSGQLAVA GANVLLNLSA SPELLGKMEY RRALVQNQSA RCLAAYVYAS SGPGESSTDL 
VFSGHSLIAE NGTILAETER FRFDSQIAVA DVDIERLVNE RFKNNSYGGA RSDASYRVID 
FLLTDVTTER LRRPVAATPF VPPVEEERAH RCHEIFEIQT TGLAKRLLHT GAKRVVIGIS 
GGLDSTLALL VTVKAFDKLG YDRSGIETIT MPGFGTTQRT RGNAERLAEL LGTGLRVISI 
DAAVRQHFAD IGHDETVHDI TYENSQARER TQILMNVANQ VGGLLIGTGD LSELALGWCT 
YNGDHMSMYA VNTGVPKTLV RYLVAWCADA EFSGDISAIL HDVCDTPVSP ELLPPHENGE 
IKQRTEDKVG PYLLHDFYLY HVVRLQHRPS KIFFLARQAF GDQFTAREIL HWLQTFYRRF 
FSQQFKRSCL PDGPKVGSVV LSPRGDWRMP SDANAAVWLN DLKQLEGVVG EE