| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2192 |
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| Symbol | |
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| ID | 3724884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2558751 |
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| End bp | 2559584 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637751793 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_357601 |
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| Protein GI | 77919786 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 86 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAA CTACCACACC TAACCTGTAT GGCATTGTCG GCTATCCCCT TGGGCATAGC
CTCAGCCCGC TCCTGCATAA CACCGCCTTC CAGGATCTGG ATCTTCCCGG CGTCCTGCTC
CCTATGGATA CGGAACCTGA AAAACTGACC ACCTTCATCG ACGCTGTCCG TCTGCTGAAC
ATCCGCGGCT GCTGCGTTAC CATTCCTCAC AAACAAGCCA TCATTCCTCT TCTTGACAAA
GTAACCGATC GAGTCAAAGC CCTTGGTGCA TGCAACCTTA TCTATTGGGA CGGCGATGCT
TTGTGCGGAG ACAACACCGA TGTTCTGGGC TTCATGTCCC CCCTGCAGGC CGACCCCCCC
GCGCCCGAGA TGAAAAAAGT GCTGCTTATG GGTGCCGGCG GCGCCGCTCG AGCCGCTGCG
GCCGGACTTA AGACCCTGGG TTTCGATGAT ATTACGGTTA CCGATATCGT CGACGACCTG
CCCGCAGCTC TGGCCGAGAC TTTTGATCTC AAAGTTGTGC CCTGGGAAGA GCGCACCAGC
GTGCCGGCGG ATATCGTCGT CAACGCTACC CCTCTGGGAA TGAAACATAA GTATGAAGAT
GAAACCGGTT ATCCTGCGGA GGCTTTCGCC GGTCGCAAAG GGATCGCTTA CGACATTGTC
TACACTCCCT TTGTCACACG CTTCCAGCGC GAAGCCGCTG CCGCCGGGTG GAGGACTATC
GCCGGTCGGG AAATGTTCAT TTCCCAGGCG GATGCTCAGT TTAAAACCTG GACCGAGAAG
AACCTTCCCG AGGTTGCGAA ACAAGCCGTA TTCGATGCCT TGAATTCAAA GTAA
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| Protein sequence | MSATTTPNLY GIVGYPLGHS LSPLLHNTAF QDLDLPGVLL PMDTEPEKLT TFIDAVRLLN
IRGCCVTIPH KQAIIPLLDK VTDRVKALGA CNLIYWDGDA LCGDNTDVLG FMSPLQADPP
APEMKKVLLM GAGGAARAAA AGLKTLGFDD ITVTDIVDDL PAALAETFDL KVVPWEERTS
VPADIVVNAT PLGMKHKYED ETGYPAEAFA GRKGIAYDIV YTPFVTRFQR EAAAAGWRTI
AGREMFISQA DAQFKTWTEK NLPEVAKQAV FDALNSK
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