Gene Pcar_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2040 
Symbol 
ID3724731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp2373201 
End bp2373890 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content54% 
IMG OID637751642 
ProductSmr domain-containing protein 
Protein accessionYP_357451 
Protein GI77919636 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00000000278249 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACGCA AGAAACAAAA CAAAAAGACT TCCAAAGAGT TCAATGTCAA CCCCTTTAAA 
ACTTTGAAGG GGTTGGTCGT TTCAGGCCAG TCGTCCTCCG GCAAAACGGC CAAAGAGGTT 
CCCGTGACAG TACCTGAAGA CCAAATCGAT GATGAAGAGC TGTTCGAACG GGAAATGAAG 
ATGTTGAGGG TCGAGAAACG TGATGCGGGT ACGGCCCAGC GACCTTTACC CCGGGAGACA 
GATCCTGAAG AGACGGCACC GGAAAAAGAC GCTGCTCCCA CTACGGATCA GGAACTGTTT 
CTGGCAGCTC TTGGTAATAT GGACAGCGTT TTTCGGGACG AGCTTCCGGT GCAGGAGGAA 
CCGCTCGCCG CGCCGCGCCG CATGCGTCAA CTGCGTCAGG GTAAACTTGT TCCCGAGGCC 
CAACTTGATC TGCATGGTGC CACACGTGAA GACGCTCGAC AAAAGGTACG TTATTTTCTC 
GAGGATGGCG TCTATCAAGG CTATAAAACC GTTCTTATCA TAACGGGACG GGGCAAAGGC 
TCGCAACAGG GGCCCGTGTT GCGCGACGAT ATGGAAAAGT ATCTTTCTCG CGAAGCCAGG 
GCCTGGGTTG CTGAATGGGG GCGGGCCCCG GCACGGTATG GCGGGGAAGG GGCCCTGGTG 
GTGTTCTTAA GGTCTTCCCG TAAAAATTGA
 
Protein sequence
MARKKQNKKT SKEFNVNPFK TLKGLVVSGQ SSSGKTAKEV PVTVPEDQID DEELFEREMK 
MLRVEKRDAG TAQRPLPRET DPEETAPEKD AAPTTDQELF LAALGNMDSV FRDELPVQEE 
PLAAPRRMRQ LRQGKLVPEA QLDLHGATRE DARQKVRYFL EDGVYQGYKT VLIITGRGKG 
SQQGPVLRDD MEKYLSREAR AWVAEWGRAP ARYGGEGALV VFLRSSRKN