Gene Pcar_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1965 
Symbol 
ID3724674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2287251 
End bp2287952 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content55% 
IMG OID637751566 
Productputative MgtC family protein 
Protein accessionYP_357376 
Protein GI77919561 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000000332806 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCTTT TGGATACGGG TTTAATTCAT TACGACATTT CCCTTTTGGG AAGGCTCCTC 
CTGGCGGCTT TGCTGGGTGC GATGCTCGGT TTTGAGCGGG AGATCCATGG CCGGCCGGCC
GGTTTTCGTA CCCATCTGCT GGTAACCATG GGAGCCTGTT TGATGATGGT GGTTTCGGAG
TATTTTTATA CCAGGTACCA TGTTCTCAGC AGTAGCGGTT CCATGCGCAT CGATCCCGGC
AGGGTTGCCG CCCAGATTGT CACGGGGATC GGTTTTCTCG GTGCCGGGGC GATTATCAAG
GATGGCTCCG CGATTCGAGG GTTGACGACG GCAGCCTGTT TGTGGATCGC GGCAGGTATC
GGAATGGCCG TTGGTGTCGG GCTGTATGTG CCGGCGTTGG CCGTTACCGG CATGGCGGTA
GGCGCTCTGA TGTTCCTCAA GCGACTGGAG GACGCCATGG CGAAAGACAG TTATGCCGAT
CTGACGATCT TTTGCGACCC TGATCCTGCC GTCAGTTCTT CGCTTGAAGC ATTGCTCGAC
GACCGGGGGC TGAGGCGGGT CGAAACCGCA ATGGAAAAAG ATAAGGTAGC GCAGGAAGTG
CGCTACGATT TTGTTGTTAA AAAGTTTGGT GGTATGGATT TCAGAACTTT TGTGGATGAG
CTTGCAGCGA TTCCGGGAGT GCGCAAAGTC CGCTATCGCT GA
 
Protein sequence
MNLLDTGLIH YDISLLGRLL LAALLGAMLG FEREIHGRPA GFRTHLLVTM GACLMMVVSE 
YFYTRYHVLS SSGSMRIDPG RVAAQIVTGI GFLGAGAIIK DGSAIRGLTT AACLWIAAGI
GMAVGVGLYV PALAVTGMAV GALMFLKRLE DAMAKDSYAD LTIFCDPDPA VSSSLEALLD
DRGLRRVETA MEKDKVAQEV RYDFVVKKFG GMDFRTFVDE LAAIPGVRKV RYR