Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1965 |
Symbol | |
ID | 3724674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2287251 |
End bp | 2287952 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637751566 |
Product | putative MgtC family protein |
Protein accession | YP_357376 |
Protein GI | 77919561 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.000000332806 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAATCTTT TGGATACGGG TTTAATTCAT TACGACATTT CCCTTTTGGG AAGGCTCCTC CTGGCGGCTT TGCTGGGTGC GATGCTCGGT TTTGAGCGGG AGATCCATGG CCGGCCGGCC GGTTTTCGTA CCCATCTGCT GGTAACCATG GGAGCCTGTT TGATGATGGT GGTTTCGGAG TATTTTTATA CCAGGTACCA TGTTCTCAGC AGTAGCGGTT CCATGCGCAT CGATCCCGGC AGGGTTGCCG CCCAGATTGT CACGGGGATC GGTTTTCTCG GTGCCGGGGC GATTATCAAG GATGGCTCCG CGATTCGAGG GTTGACGACG GCAGCCTGTT TGTGGATCGC GGCAGGTATC GGAATGGCCG TTGGTGTCGG GCTGTATGTG CCGGCGTTGG CCGTTACCGG CATGGCGGTA GGCGCTCTGA TGTTCCTCAA GCGACTGGAG GACGCCATGG CGAAAGACAG TTATGCCGAT CTGACGATCT TTTGCGACCC TGATCCTGCC GTCAGTTCTT CGCTTGAAGC ATTGCTCGAC GACCGGGGGC TGAGGCGGGT CGAAACCGCA ATGGAAAAAG ATAAGGTAGC GCAGGAAGTG CGCTACGATT TTGTTGTTAA AAAGTTTGGT GGTATGGATT TCAGAACTTT TGTGGATGAG CTTGCAGCGA TTCCGGGAGT GCGCAAAGTC CGCTATCGCT GA
|
Protein sequence | MNLLDTGLIH YDISLLGRLL LAALLGAMLG FEREIHGRPA GFRTHLLVTM GACLMMVVSE YFYTRYHVLS SSGSMRIDPG RVAAQIVTGI GFLGAGAIIK DGSAIRGLTT AACLWIAAGI GMAVGVGLYV PALAVTGMAV GALMFLKRLE DAMAKDSYAD LTIFCDPDPA VSSSLEALLD DRGLRRVETA MEKDKVAQEV RYDFVVKKFG GMDFRTFVDE LAAIPGVRKV RYR
|
| |