Gene Pcar_1936 details

Gene Information

• Locus tag: Pcar_1936
• Symbol: ptsN
• ID: 3724626
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 2251270
• End bp: 2251731
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637751537
• Product: phosphotransferase system enzyme IIA, regulates nitrogen metabolism
• Protein accession: YP_357347
• Protein GI: 77919532
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR00848] PTS system, fructose subfamily, IIA component

Plasmid Coverage information

• Num covering plasmid clones: 58
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATCG TCGACCTGCT TAACCCCGCC GCCATTATTG CAGACCTGGA AGCGGTGGAA 
AAAGATGCCG TGCTAGAAGA ACTGGCAGGA GCTGCAAACA AGATCGAGAA AGGTCTTGAG 
CACGATGAGG TCTTACGTGT ACTGCAGGAG CGTGAGCGTC TGGGCAGTAC CGGGATCGGT 
GAAGGGGTAG CGATACCTCA CGGTAAGCTC CGCACCATCG ATCAACTTTT GCTTTCTTTC 
GGTCGCAGCC GCAAGGGAGT CGATTTCGAC TCCCTTGACG GCAAACCGGC GCAGCTTTTC 
TTTTTGTTGC TTGCCCCGGA AGAATCGGTG GGAGTGCATC TCAAAACTCT TGCCCGTATC 
TCCAAGCTGT TAAAAAGCCC GGCCGTGCGT CAACGTTTGC TGGGTGCCGA TTCCGGTGAC 
GAGCTTTATC GCATCATTGG CGAAGAAGAA GAGCGGCTTT GA 

 

Protein sequence

MKIVDLLNPA AIIADLEAVE KDAVLEELAG AANKIEKGLE HDEVLRVLQE RERLGSTGIG 
EGVAIPHGKL RTIDQLLLSF GRSRKGVDFD SLDGKPAQLF FLLLAPEESV GVHLKTLARI 
SKLLKSPAVR QRLLGADSGD ELYRIIGEEE ERL