Gene Pcar_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1908 
Symbol 
ID3724598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2223966 
End bp2224610 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content52% 
IMG OID637751509 
Productphosphatidylserine decarboxylase 
Protein accessionYP_357319 
Protein GI77919504 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAATC AGAATCAGCC TGTTGCTATT GAAGGCTATC CATTCATTGG GTTGTTTGCT 
TTTATTACTT TGGTCTTTGC TCTTCTCGGT TGGAGTGTCT GCACTCTTTT GTTCCTGGGT
CTGACACTTT TTGCGGCATA TTTTTTTCGT AATCCGGATC GTTATAGCGA TGCGGAAGAT
GCGGCTATAC TGGCGCCGGC CGATGGCAAG GTCGTTTATG TCGGCCCCGC GCTTGAAGAG
CGTTATTTTA AAAGCGAAGT GACCAAAATC AGTATCTTCA TGTCGGTCTT CAACGTGCAT
GTCAACCGGG TGCCGATGGC CGGCAAGGTT GTCGATATGT TCTACAATAA GGGCCAGTTT
CTGAATGCCG CCATGGATAA GGCCAGCCTG CACAATGAAC AATCCGGGAT GTTGCTTGAG
CATACCTCCG GTCGGCGGAT GCTGGTGGTT CAGATCGCCG GTCTGATTGC ACGGCGCATT
GTGACCTATC CGGTCGTTGG CGATATTCTG CAGCGGGGTG CCCGGTACGG GCTGATTCGC
TTCGGATCAC GGGTTGATAT CTATCTGGAG GACGACGTCG ACATTCAGGT GACTGTCGGA
GAACGTGTTT GCTGCGGGGA GACTGTCCTC GGCTTCCTGA AGTAA
 
Protein sequence
MRNQNQPVAI EGYPFIGLFA FITLVFALLG WSVCTLLFLG LTLFAAYFFR NPDRYSDAED 
AAILAPADGK VVYVGPALEE RYFKSEVTKI SIFMSVFNVH VNRVPMAGKV VDMFYNKGQF
LNAAMDKASL HNEQSGMLLE HTSGRRMLVV QIAGLIARRI VTYPVVGDIL QRGARYGLIR
FGSRVDIYLE DDVDIQVTVG ERVCCGETVL GFLK