| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1829 |
|---|
| Symbol | panC |
|---|
| ID | 3724519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2138961 |
|---|
| End bp | 2139812 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637751431 |
|---|
| Product | pantoate--beta-alanine ligase |
|---|
| Protein accession | YP_357240 |
|---|
| Protein GI | 77919425 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0414] Panthothenate synthetase |
|---|
| TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCA TCAACGATAT TGCCACAGTC CAGAGCCGCT GTCTCCAGGC GCGGCAAGCC
GGTCAGCGTA TCGCCTTCGT TCCGACCATG GGGTATCTGC ATGAGGGGCA TCTGTCCCTG
ATGCGCGAAG GGCGCAAGCG CGGCGATCTG CTGGTCGCCT CCATTTTTGT CAATCCTACC
CAGTTCGGTC CCAAGGAGGA CCTTGCGTCC TACCCGAGGG ATCTGGAGCG CGATGCCGAG
CTGGTCCGCG AGGTCGGTGT CGATATCCTG TTCCATCCGA CGCCTGCAAC CATGTATCCC
AACGGTTACA AGACATACGT GCATGTCGAG GGGCTGACCA AGACCCTGTG CGGCGAAAGC
CGGCCCGGAC ATTTTCGCGG CGTGACCACG GTGGTCTGTA AGTTGTTCAA TATCGTTCAG
CCCGACATAG CCCTGTTCGG GAGGAAAGAT TTTCAGCAAT TGGCCGTCTT GCGCCGCATG
GCCGCGGACC TTAACCTGCC CGTGGAAGTT GTCGGGCTGC CGACGGTACG GGAAAAGGAC
GGTTTGGCCA TGAGTTCGCG CAACGTCTTT TTGTCTGCCG AAGAGCGCAA ACAGGCGCTG
GCTCTGGTCG ACGCTTTGCG GCAAGCCCGG GTTGCGGCGC ATCATGGTGA GCACCACGCC
CGGCGTCTGG TCGGCCTGGT CCGTGAACGC ATCGGCAGAG AGCCGGACGC CCAAATCGAT
TATATAAAGA TCTGTGACGG CGACACGTTG GAAGGTGTCG ACCGGATAGA TGCCAATTCG
GTGCTGTTGA TGGCAGTGCG AATCGGCCAA ACGCGATTGA TCGACAATAA CTATATCCTT
GAGGAGGTTT GA
|
|---|
| Protein sequence | MDIINDIATV QSRCLQARQA GQRIAFVPTM GYLHEGHLSL MREGRKRGDL LVASIFVNPT
QFGPKEDLAS YPRDLERDAE LVREVGVDIL FHPTPATMYP NGYKTYVHVE GLTKTLCGES
RPGHFRGVTT VVCKLFNIVQ PDIALFGRKD FQQLAVLRRM AADLNLPVEV VGLPTVREKD
GLAMSSRNVF LSAEERKQAL ALVDALRQAR VAAHHGEHHA RRLVGLVRER IGREPDAQID
YIKICDGDTL EGVDRIDANS VLLMAVRIGQ TRLIDNNYIL EEV
|
|---|
| |