| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1779 |
|---|
| Symbol | |
|---|
| ID | 3724468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2082376 |
|---|
| End bp | 2083728 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637751383 |
|---|
| Product | phosphomannomutase ManB |
|---|
| Protein accession | YP_357192 |
|---|
| Protein GI | 77919377 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1109] Phosphomannomutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 65 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAATT TAACTTGCTT TAAAGCCTAC GACATCCGCG GTCGTCTGCC GGATGAACTC
AACGAGGAAA TCGCTTACCG TATCGGGCGG TCTTATGCCG AGTATCTGAA GCCGGGCCGG
GTGGTGGTGG GTCGGGATGT GCGGCTCAGC AGTGCGGCTT TGTGTGATGC GCTGAGCAAC
GGGCTTCTTG ATGGTGGGAC GGATGTTTTC GATATCGGTT TGTGCGGTAC GGAAGAGATC
TATTTCGCCA CCTTTGCCGA GGAGATGGAT GGCGGCATTA TGGTGACGGC CAGTCACAAT
CCCATGGATT ACAACGGCAT GAAACTGGTG CGGCAGGGAT CGCGGCCTAT CAGTGGCGAC
AGTGGTCTGG ATGCCATTCG GGAGTTGGCT CAGGACAACC AGTTTGCTCC GCCGGTACAA
CGCGGTACCC GCACTGTTCT GGAGACCCGG CCGCGTTATA TCGAACATCT GCTGGGCTAT
ATCGACCGGC AATCATTGCG GCCTCTGAAG ATCGTGGTCA ATGCCGGCAA CGGTTGTGCC
GGTCCGGTAC TGGATCAGCT GGAGCAGCAT CTGCCCTTTG AGTTCATCAA GGTCCATCAT
GATCCGGACG GTGCCTTTCC CAACGGCATT CCTAATCCCC TGTTGCCGGA AAACAGGTCG
GCTACGGCCG AAGCGGTGGT GGCCCACGGT GCGGATCTGG GGATTGCCTG GGATGGTGAT
TTTGATCGTT GTTTTCTGTT CGACGAGAAG GGTGGCTTCA TCGAGGGGTA TTATGTGGTG
GGATTGCTGG CGGCGGCGTT TCTGCAGCAC CACCCCGGAG CCCGCATTAT CCACGACCCC
CGTCTGACCT GGAATACCAT GGATCTGGTG TCGGAACTGG GCGGCACGGC GGTCATGAGC
AAGACCGGCC ATGCTTTCAT CAAGGAACGC ATGCGGCAGG AAGATGCGGT GTACGGCGGA
GAGATGAGCG CTCACCATTA CTTCCGGGAT TTTGCCTACT GCGACAGCGG CATGATTCCC
TGGCTGCTGG TCACCGAACT CATGAGCCGC AGTGGCCAGC CTCTTTCCAG CCTGGTGGGT
GAGCGGATCA AATGTTATCC CGCCAGCGGC GAGATCAATC GTCGCCTGAG CGATCCCGCT
GCAACTCTGT CCAACATCGA GAATCATTAT CGTGTCGGTG CGAAAGCAAC CGATTTTACG
GATGGATTGA GTATGGAGTT CGATCAGTGG CGGTTTAACC TGCGCTGCTC CAATACCGAG
CCGGTGGTGC GGTTGAATGT CGAAACCCGG GGTGATCAGG GGTTGATGGA GCAGAAGACG
CAGGAAATCC TAGGCATGAT GGATGCGCGT TAG
|
|---|
| Protein sequence | MTNLTCFKAY DIRGRLPDEL NEEIAYRIGR SYAEYLKPGR VVVGRDVRLS SAALCDALSN
GLLDGGTDVF DIGLCGTEEI YFATFAEEMD GGIMVTASHN PMDYNGMKLV RQGSRPISGD
SGLDAIRELA QDNQFAPPVQ RGTRTVLETR PRYIEHLLGY IDRQSLRPLK IVVNAGNGCA
GPVLDQLEQH LPFEFIKVHH DPDGAFPNGI PNPLLPENRS ATAEAVVAHG ADLGIAWDGD
FDRCFLFDEK GGFIEGYYVV GLLAAAFLQH HPGARIIHDP RLTWNTMDLV SELGGTAVMS
KTGHAFIKER MRQEDAVYGG EMSAHHYFRD FAYCDSGMIP WLLVTELMSR SGQPLSSLVG
ERIKCYPASG EINRRLSDPA ATLSNIENHY RVGAKATDFT DGLSMEFDQW RFNLRCSNTE
PVVRLNVETR GDQGLMEQKT QEILGMMDAR
|
|---|
| |