Gene Pcar_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1601 
Symbol 
ID3724301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1870133 
End bp1871302 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content51% 
IMG OID637751196 
Producthypothetical protein 
Protein accessionYP_357015 
Protein GI77919200 
COG category[S] Function unknown 
COG ID[COG3864] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones83 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAT CCTCAAAGCT GGCAAAAGCG ATTGCGAGGA CGGTGCTCGA TCACCCTTTT 
TTCGCTACAT TGCTGCTCCG TATGCGGATT TATGAGGATG CAAACACCAA AACCGCCTGT
ACCAACGGAA GGGAAATCCG ATACAACCCG CAGTTTGTCG ACTCTTTGCA CGTCGATCAG
GTGGTGTTTG TTCTGGCCCA TCTGGTTATG CATGTTGCCC ATTTTCATCC GTTGAGGAGG
GGAGGGCGAA ATCTCGGCAA ATTCAATAAA GCCGGTGATT ACGCTATAAA CGGAATCCTT
AAGGATGCAG GTCTCAGCAT GTTGCCTGGC GCTTTATATA AAAAAGAATT CGCCAATCTT
GCCGCAGAGC AAATTTATGA ACGCCTGCCC GGATCTGCGC GCGAGGAGGA ACACGCGGGA
ACCGGTCGAG AGGACGAAGA AGGTTATCGG GATGATCCCG GTGGATGCGG CGGTTTCGAA
GATGCCGGGA ACGAATACGG CAAACCGCTG TCAAGGGCAG AGAGGGAACG CGAAGAAGCG
GAAATTACCA TTGCGATACA GCAAGCTGCC CAGGCCGCAA AAGCTCAGGG GAAATTGCCG
GCTTCCCTTG AACGTCTGGT GAACGAAAGT GTTCATGCTA TTCTCGATTG GCGGGAAATG
CTGAGAAGTT TTATCGATCG TACGGGCCGC AACGATTATT CGTGGAAACA ACCGAACCGG
CGCCACATTG CCAAGGGGAT CTATCTTCCG AGTTTTTGCT CAAACGGGCT CAAACCTCTT
GTTGTTGCCG TGGATACTTC CGGCTCGATC GGGCAGAGCG AGTTGAATCA ATTTCAGGCC
GAACTGAACG ATATCCTTCA AAGTTATCCT TCCACTGTCA GTGTGGTCTA TTGCGATAGC
GACATAACCG GAACGCAGAT CTTTACCCCG GATCAATATC CTGTGGAGTT GAATGCGACA
GGGTTCGGAG GTACCGATTT GTGTCCGCCT TTTGAGTGGG TCTCTAAAAA CGTGCCCGAT
GCCGGTTGCA TAATTTACCT GACAGACCTG CGGGGAAACA GTCCGGACAT CGATCCCGGT
ATTCCAACTC TGTGGGTCTC CACCATCGGT GACCGGGATA TCCCATCGCA CTATTATCCA
AAGTTCGGGC AAATCGCCAC CCTTGAATAA
 
Protein sequence
MEKSSKLAKA IARTVLDHPF FATLLLRMRI YEDANTKTAC TNGREIRYNP QFVDSLHVDQ 
VVFVLAHLVM HVAHFHPLRR GGRNLGKFNK AGDYAINGIL KDAGLSMLPG ALYKKEFANL
AAEQIYERLP GSAREEEHAG TGREDEEGYR DDPGGCGGFE DAGNEYGKPL SRAEREREEA
EITIAIQQAA QAAKAQGKLP ASLERLVNES VHAILDWREM LRSFIDRTGR NDYSWKQPNR
RHIAKGIYLP SFCSNGLKPL VVAVDTSGSI GQSELNQFQA ELNDILQSYP STVSVVYCDS
DITGTQIFTP DQYPVELNAT GFGGTDLCPP FEWVSKNVPD AGCIIYLTDL RGNSPDIDPG
IPTLWVSTIG DRDIPSHYYP KFGQIATLE