Gene Pcar_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1331 
Symbolgap-1 
ID3723559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp1555798 
End bp1556799 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content57% 
IMG OID637750922 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_356750 
Protein GI77918935 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.327115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTAA AAGTAGCAAT TAACGGCTTC GGTCGCATCG GGCGCAGCAT ATTTCGCGCA 
GCCTGGGCTG ACAAAGACGT CGAAATCGTG GCTATTAATG ATCTGAATCC GGCAGAGGTG 
CTTGCCCATC TGCTTAAGTA CGATTCCGTA CGCGGAACCT TTGCTCCGCC CGTGCAGGTA 
ACTGCCAGTG GCCTGATGGT TGCCGAACGG TTGATCAGGG TGAGCGAAAA GCAGGATCCC 
GCCGATTTGC CCTGGCGGGA ACTCGGCGTC GATATCGTCC TTGAAGCAAC CGGCCAATTT 
ACCGAGCGCG CCCAGGCCGC CAGACACCTT GAGGCCGGTG CGGGGCGCGT GATCATTACT 
GCGCCAGGTT GCGGTGAAGA CATAACCCTG TGCATGGGGA TCAACCACCG GCAATTCGAT 
CCCGAAACGC ATTTCGTTAT TTCCAATGCA TCCTGTACCA CCAATTGCCT GGCTCCGGTA 
GCCAAGGTGC TGATGGATAA TTTCGGCGTG GTTAAGGGCA TGATGACAAC GGTTCATTCC 
TATACCAACG GTCAGCAGAT TCTGGATTAT CCCGCAAAAG ACCTACGTCG GGCTCGGGCT 
GCAGCTTTGT CCATGATACC GACCACCACC GGGGCGGCCC GCGCTGTGGC CAAGGTGCTG 
CCCGAGTTGG CGGGACGCCT GGACGGGATC GCGGTGCGGG TGCCGACGCC CAATGTCTCC 
CTGATTTCCC TGGTTACGGA AACCCGGAAA AACACCACCA TCGAATCCGT CAACCATGCG 
TTGCACATGG CGGCTGAAGG GCCGTTGAAA GGTGTGTTGG CTTATTCCGA AGAACCCTTG 
GTGTCCGTCG ATTTCAATGG CCATCCGGCG TCTTCGGTGG TCGACGCGCT TTCCACCAAT 
GTGCTCGGTG GTAACATGGT CAAGGTCTTG TCCTGGTACG ACAACGAGTG GGGATACTCC 
AACCGGGTGG TGGATTTGGT CCGCTATGTT GCATCTTGCT GA
 
Protein sequence
MAVKVAINGF GRIGRSIFRA AWADKDVEIV AINDLNPAEV LAHLLKYDSV RGTFAPPVQV 
TASGLMVAER LIRVSEKQDP ADLPWRELGV DIVLEATGQF TERAQAARHL EAGAGRVIIT 
APGCGEDITL CMGINHRQFD PETHFVISNA SCTTNCLAPV AKVLMDNFGV VKGMMTTVHS 
YTNGQQILDY PAKDLRRARA AALSMIPTTT GAARAVAKVL PELAGRLDGI AVRVPTPNVS 
LISLVTETRK NTTIESVNHA LHMAAEGPLK GVLAYSEEPL VSVDFNGHPA SSVVDALSTN 
VLGGNMVKVL SWYDNEWGYS NRVVDLVRYV ASC