Gene Pcar_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1215 
Symbol 
ID3723673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp1422924 
End bp1423577 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID637750804 
Producthypothetical protein 
Protein accessionYP_356634 
Protein GI77918819 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.000301494 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACT TGCACACCCA TACCGTTTTT AGCGATGGAG AGTTGATTCC CGCTGAACTT 
ACCCGTCGGG CAGCTGTGGC CGGGTATCGC GCCATCGGTA TCACCGATCA TGGCGACCCG 
AGTAATATCG ACTTTATCAT TCCGCGTATC GTCCGGGTTG CGGAAGGATT GGGCGCCGCG 
TGGGGGTTGA CGGTGGTGCC GGGGATTGAG CTGACCCATG TTCCGCCCCC AATGATCGCC 
GAAGTCGCCA GGCAGGCCCG GGGGCTTGGT GCCCGGCTGG TCGTGTGTCA TGGCGAAACC 
ATTGCCGAAC CGGTCGCAGC GGGTACCAAT CGCGCGGCAC TGGAGGCCGA TATCGATATC 
CTGGCACATC CCGGGCTGCT TTCCGAAGAA GATGCGGCTC TGGCAGCCCG GCGGGGTATC 
TGTCTGGAAA TCACCACCCG CAAGGGGCAT TCGTTGACCA ACGGCCACGT GGCGCGCGTG 
GCGCTGGCCG CCGGAGCGGC TTTGATTGTG AATACGGACA GTCATGCGCC CGGCGATTTG 
ACGCCGCTGG AGCAGGCGCG GCGGATCGCT CTTGGCGCCG GTTTGAACGA GGCTCAGTTT 
CAGCAGGCTC GTCAGAATGC CGAGGATCTG GTGCGCAAGC TGATGGGGGG CTGA
 
Protein sequence
MIDLHTHTVF SDGELIPAEL TRRAAVAGYR AIGITDHGDP SNIDFIIPRI VRVAEGLGAA 
WGLTVVPGIE LTHVPPPMIA EVARQARGLG ARLVVCHGET IAEPVAAGTN RAALEADIDI 
LAHPGLLSEE DAALAARRGI CLEITTRKGH SLTNGHVARV ALAAGAALIV NTDSHAPGDL 
TPLEQARRIA LGAGLNEAQF QQARQNAEDL VRKLMGG