Gene Pcar_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1185 
SymbolflgD 
ID3723682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1392201 
End bp1392857 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content58% 
IMG OID637750774 
Productflagellar hook initiation protein FlgD 
Protein accessionYP_356604 
Protein GI77918789 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones96 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCG TTACAGATGT AAACCAGACG GCCTCCAGCA GCATGACAGG CAGTCTCACC 
GGATCGAGCA ACCTGGGCAA AGATGATTTT CTGCTGCTAC TCGTTACCCA GCTGCAGAAT
CAGGATCCCC TCAACCCTCA AGATCCGACG GAGTTCACCT CGCAGTTGGC TCAATACAGT
TCCCTGGAAC AGCTGTTCAC CGTCAACGAC CAGCTTCAGC AACTGGAGAC AACCAACGGC
AATGTGGTGC AAATGACCGC CTTGGGCCTG ATGGGCCAGG ATGTGGTGGT GCAATCCGAC
AGCTTCAAGT TGGGCGGCAC CCCCGTCACC CTGGGCTACG ACCTGTCGAA CAACGTGGAT
GAAGTCCAGC TGGTGGTTCA AAACGCCAAG GGGCAAACCG TAGCCACCCT GGAAGGAACC
GACTTGTCCG CGGGTGAACA TTTCATCCAG TGGAACGGCA CCGACGCCAA CGGTGCGTCA
CTGCCTGCCG GTGACTATCA ACTGCAAATC AGCGCCCGCC GCGATGGCGA AACGGCCTCC
GGCAGCCCGC TGGTCAAAAC CGCTGTCAGC GGAGTCGATC TCAACGGCGG CAGCAGCACA
CTGGTCACCA GCCTCGGGGA ATACAATCTG AGCAAGGTCA CCAGCGTCAG GAATTAA
 
Protein sequence
MTTVTDVNQT ASSSMTGSLT GSSNLGKDDF LLLLVTQLQN QDPLNPQDPT EFTSQLAQYS 
SLEQLFTVND QLQQLETTNG NVVQMTALGL MGQDVVVQSD SFKLGGTPVT LGYDLSNNVD
EVQLVVQNAK GQTVATLEGT DLSAGEHFIQ WNGTDANGAS LPAGDYQLQI SARRDGETAS
GSPLVKTAVS GVDLNGGSST LVTSLGEYNL SKVTSVRN