Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1185 |
Symbol | flgD |
ID | 3723682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 1392201 |
End bp | 1392857 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637750774 |
Product | flagellar hook initiation protein FlgD |
Protein accession | YP_356604 |
Protein GI | 77918789 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 96 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACCG TTACAGATGT AAACCAGACG GCCTCCAGCA GCATGACAGG CAGTCTCACC GGATCGAGCA ACCTGGGCAA AGATGATTTT CTGCTGCTAC TCGTTACCCA GCTGCAGAAT CAGGATCCCC TCAACCCTCA AGATCCGACG GAGTTCACCT CGCAGTTGGC TCAATACAGT TCCCTGGAAC AGCTGTTCAC CGTCAACGAC CAGCTTCAGC AACTGGAGAC AACCAACGGC AATGTGGTGC AAATGACCGC CTTGGGCCTG ATGGGCCAGG ATGTGGTGGT GCAATCCGAC AGCTTCAAGT TGGGCGGCAC CCCCGTCACC CTGGGCTACG ACCTGTCGAA CAACGTGGAT GAAGTCCAGC TGGTGGTTCA AAACGCCAAG GGGCAAACCG TAGCCACCCT GGAAGGAACC GACTTGTCCG CGGGTGAACA TTTCATCCAG TGGAACGGCA CCGACGCCAA CGGTGCGTCA CTGCCTGCCG GTGACTATCA ACTGCAAATC AGCGCCCGCC GCGATGGCGA AACGGCCTCC GGCAGCCCGC TGGTCAAAAC CGCTGTCAGC GGAGTCGATC TCAACGGCGG CAGCAGCACA CTGGTCACCA GCCTCGGGGA ATACAATCTG AGCAAGGTCA CCAGCGTCAG GAATTAA
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Protein sequence | MTTVTDVNQT ASSSMTGSLT GSSNLGKDDF LLLLVTQLQN QDPLNPQDPT EFTSQLAQYS SLEQLFTVND QLQQLETTNG NVVQMTALGL MGQDVVVQSD SFKLGGTPVT LGYDLSNNVD EVQLVVQNAK GQTVATLEGT DLSAGEHFIQ WNGTDANGAS LPAGDYQLQI SARRDGETAS GSPLVKTAVS GVDLNGGSST LVTSLGEYNL SKVTSVRN
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