Gene Pcar_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1179 
Symbol 
ID3723715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1380969 
End bp1382111 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content52% 
IMG OID637750768 
ProductHD-GYP domain-containing protein 
Protein accessionYP_356598 
Protein GI77918783 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCG ACCGGGATCG GGCCATTCAC GATTTTGCCA GAGAATTGGC AACAGCCATT 
TCGACAGTAT CGCTGTATTC AGCCGAACAT GCCCAGGTGG AGCGACTGTG CCGTTCGATA
CTTGCAAACA TTCAAAAGGT TATGGCGGGC AAGGACGATA TTTCCCTTGT GGTTATAGAT
AACGAGTTGA TCGTCGATGG CATCCCCTTG AGAGGAAGTT TGCATTTCGG CCGGCTGGCG
CAGCTTCTGG CGTTACGGGG CATCGGGCAC GTGAAGCTGA TCCGGGGTGT CGGGCTTGAA
GAAATCCGGG ACATGGTCGA ACATCTCTCG AAACGAAACG CCGAGCATGC CGTTCACTCC
ACTGCCGGCA TCCGTTACGG AAAAGTCGGG GTGCGGTTTT CTTACAACGA CGAAGAATCA
TCGGAAGTAA GTCCCGGCGA GGCCGTTGCA GGTGCGAGCC TGTTTGACGG AGAAATTTCG
AAGTACAGGG AAATCTGCCG GGGCATCAGG AAGCATAAGA CACTGAAGGT GGCCGGAATC
ATGGAGATTG TCTCCGGCTT CATTGCCACG GTCAAAAGTG AGGCAGATCC TTTGTTGGCG
TTGGCGCCGG TTCGATCTTC AGACGAATAT ACATTTACGC ATTCCGCGAA TATCTGCATT
TTGAACCTTG CCCAGGCCAT GGCTCTCGGT ATAGACGGGC CGGTGCTTCA TGACATCGGC
ATCGCCGCCA TGCTTCACGA TGTCGGCAAG TTTTTCATTC CCGAGGAGGT GCTTAACAAG
CCGGGCCGCC TGGACGAAAA GGACTGGAAT TTCGTTAAGC AACATCCTCT ATGGGGAGCC
CAGTATCTTC TGGATACTCC CGGAGTGCCT TCGTTAGCCA TCATTACGGC ATACGAGCAC
CATCTCAAAT ACGATTTTTC CGGTTATCCC GTCGTTCCGG CTTCCTGGCA ACAGAATCTC
TGCACCCAGA TGACCACGGT GTCCGATTTT TTCGATGCCC TGCGGACCAA ACGTCCATAT
CGCGACGCAC TGGAGATGGA AAAAATCTCC GCTTTAATGC TGGAGATCGC CGGAACCGAA
CTTAATCCGA TACTTACGAA AAATTTCCTC AAGATCTTCA ACAGAATATC GGAAATGGCC
TGA
 
Protein sequence
MKTDRDRAIH DFARELATAI STVSLYSAEH AQVERLCRSI LANIQKVMAG KDDISLVVID 
NELIVDGIPL RGSLHFGRLA QLLALRGIGH VKLIRGVGLE EIRDMVEHLS KRNAEHAVHS
TAGIRYGKVG VRFSYNDEES SEVSPGEAVA GASLFDGEIS KYREICRGIR KHKTLKVAGI
MEIVSGFIAT VKSEADPLLA LAPVRSSDEY TFTHSANICI LNLAQAMALG IDGPVLHDIG
IAAMLHDVGK FFIPEEVLNK PGRLDEKDWN FVKQHPLWGA QYLLDTPGVP SLAIITAYEH
HLKYDFSGYP VVPASWQQNL CTQMTTVSDF FDALRTKRPY RDALEMEKIS ALMLEIAGTE
LNPILTKNFL KIFNRISEMA