| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1164 |
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| Symbol | fliR |
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| ID | 3723700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1361367 |
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| End bp | 1362143 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637750754 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_356583 |
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| Protein GI | 77918768 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 76 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGATCG AGCTGTTTTC CATCGCATCG ATCCAGGGGT TTCTGGTCTG CGCCGCTCGC
GTCACCTCCC TGTTCAGTGC CCTGCCGATT TTCGGCAGCG CCCAGACACC GGTACGCATA
CGCATCGCCC TGTCCGTCAC CATTGCACTG GTGGTTTACC CCTTGCTGCC CGAGTTGCTG
CCGGCAACGC CTCTGACGCC CATAGGACTG GGAATTCTCA TAGCCCAGGA AACCATGGTC
GGACTGATGA TCGGCTTTAT CGCGCGGCTG GTATTTATTG CCGTGGAGTT CGGGGGCTCG
ATTATCGGCT ATCAGATGGG TTTCGCCGCA GCCAACGTTT TCGATCCCCA GAGCCAGCAT
CAGGTTTCGC TGATTTCCCA GTTCCAGAAC GTATTTGCCA TTCTGCTGTT TCTGGCGTTT
GACGTCCACC ACCTGTTTCT TCGACTCATC GCCGACTCCT ATCGGCTGCT GCCGGCCGGC
GATGCGAAAC TGGGCGGCGA AGCGGTCCTT TTTCTCTCCC GGTTGACGGG CGAGATGTTC
ACCCTGGCGG TTAAATTCAG CGCCCCGGTC CTTATCGTTC TGCTTCTGTC GGGGCTGGTG
CTCGGCATCA TGTCGCGCAT GTTCCAGCAG CTCAACGCCT TTATGCTGTC TTTCCCCATC
AACATCGGGG TGTCTTTTTT GTCCATCGGC CTGACCATGC AATTGCTGGC GGTCATGCTG
CAGCGGGAAT TCGGCGCCCT GCAGCAACGC TTTTACGCCT TATTGGATCT GCTGTAG
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| Protein sequence | MQIELFSIAS IQGFLVCAAR VTSLFSALPI FGSAQTPVRI RIALSVTIAL VVYPLLPELL
PATPLTPIGL GILIAQETMV GLMIGFIARL VFIAVEFGGS IIGYQMGFAA ANVFDPQSQH
QVSLISQFQN VFAILLFLAF DVHHLFLRLI ADSYRLLPAG DAKLGGEAVL FLSRLTGEMF
TLAVKFSAPV LIVLLLSGLV LGIMSRMFQQ LNAFMLSFPI NIGVSFLSIG LTMQLLAVML
QREFGALQQR FYALLDLL
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