Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0904 |
Symbol | |
ID | 3724162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1068830 |
End bp | 1069741 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637750496 |
Product | tRNA-dihydrouridine synthase |
Protein accession | YP_356328 |
Protein GI | 77918513 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.377154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGCCC CCATGCAGGG TTTGACCAAT ATGGCGTTGC GGGCGGTGTT GGCCGGTTTG GGCCATCCCG ACGTGTTGTT CACCGAATTC GTGCGGGTGG CTCCCGGGCG CATGCCGGTT TTTCCCGGGC GGCAGTGGAG TGCAGATTGT TGTGAAATGT TGCCCTTGGT TGTGCAACTC ATCGGGCACG ATGACCGGTC GCTGGCCATT GCTGCTCAGT CCGCTCAACA GGCCGGCGCC CGGCATATCA ATCTGAACCT CGGTTGTCCT CACGGGCGTA TGACCAGTGC GGCGGTAGGG GGGAATCTGC TGGCGCAACC GGAACGTATC GCACCGATGC TGGCTGGCTT ACGCAAGGTG GTCAGCGGTT CCTTCTCCGT CAAACTGCGG GCCGGGTACG AGGATCCCAC CCAGATTTTT TCGTTATTGC CCATGCTGGA GGATGCCGGC GTCGATTTTT TCATCCTGCA TCCCCGCACG GTGTTGCAGG GTTATGACGG GCAGGCCGAC CACGCTATTA CGGCGGCGGT GGCCAAGCGC ACCTGTCTGC CGCTTATCGC CAACGGCGAT ATCCGTAAAC CGGCCGACGG ATGTCGGCTG CTGGAGCAAA CAGACATTGC CGGATTGATG TTGGGGCGTG GTGCCATTGC CGATCCCTTG TTGTTTGAGC GGTTGCGGCG CAGAGCACCC GCCAGGCCGA ACCGGCGGCA GCGTGCCGTT TTGTTGCGTC GGTATTTGAC AGAGGTGGCG GACCGATATG CTGAACGGTT TTGCGGTGAC ACCCAGGTGC TGGGCAAGCT CCGTGAGATT CTCAAGCTGA TCGATGACCC CGCTTTTGTA CAGCTTATCG ATAAACTTAA AAAATGCCGC AAGTTGTCGT TGTTTAACGC CTTGCTTGCG GAGCTGGAGT AG
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Protein sequence | MLAPMQGLTN MALRAVLAGL GHPDVLFTEF VRVAPGRMPV FPGRQWSADC CEMLPLVVQL IGHDDRSLAI AAQSAQQAGA RHINLNLGCP HGRMTSAAVG GNLLAQPERI APMLAGLRKV VSGSFSVKLR AGYEDPTQIF SLLPMLEDAG VDFFILHPRT VLQGYDGQAD HAITAAVAKR TCLPLIANGD IRKPADGCRL LEQTDIAGLM LGRGAIADPL LFERLRRRAP ARPNRRQRAV LLRRYLTEVA DRYAERFCGD TQVLGKLREI LKLIDDPAFV QLIDKLKKCR KLSLFNALLA ELE
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