| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0899 |
|---|
| Symbol | |
|---|
| ID | 3724157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1061363 |
|---|
| End bp | 1063288 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637750492 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_356324 |
|---|
| Protein GI | 77918509 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4715] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 74 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCTA TTCGCGAAAA ATTTAAAGAC CTTACCCACG AAGACCTGCG GGACTGGGCC
GGCGACAGGA TCTACCAGCG CGGCAAAGAC TATACCTCTT GCGTATCGCA GCTTTCGCGA
ACCGAAGACG GCACGCTGGT CGCGTGGGTT TCCGGTAACG ACGAGTATGC CACCTGGGTC
CGGCACGAGG GGCAGGCTGA TTTCGATTAC AACTGCACCT GCCCTTACGA TTACGGTCCA
TGCAAACACG CCGTGGCCGT ATTGCTGGCG GCGGCCTCCC GGATCAGGCA GCGCAAGGAG
ATACCGCTGC TTGCTCCGGA TGACGAGCTG TATCTGGAGG CCTTCGAAAC GGCACAGGAT
GATTGGGACG ATGAAGATGA CACCGCACCC TCTTTCGTCC CGCCGGCACC CGGTACGATC
AAATCTGCAC AAAACCTCGA AAAGCTGCTG GCGGAAAAAT CCCGCGACCA GCTGCAGCGC
TTGCTCGTAA ACCTGGCCGG CGAGTTTCCC GATGTGGCCC GGCGAATTCG CGAGAAGGGG
CAACTCGAAA GCGGAAAGGT GGACCAGCTG GTGCGCTCAT TGCGCAAGGA AATTCGCAAA
CTCACGGCCC AGGAGGCCTG GTATAGCCAT TGGGAACATC GAGGGAACCT GCCCGACTAT
TCCCATCTGG AAAAACAGCT GCTGGCGCTG CTCAACAATG GCAACGCCGA TGCGGTGATG
GAGTTGGGAG AGGAACTCTG GACGCGCGGC ATTGAGCAGG TGGAGCAATC CGATGACGAA
GGCATGACCG CCGAGGCGAT TTCCGCGTGT CTTGCAATCG TCCTTAAGGC GTTGCCGCAA
ACATCCCTGT CGCCTGCTGA ACAATTGCTG TGGCTGGCCA AGCATGAACT TGACGATCAG
TACGGCTTGC TCGGGGATAT CGATTCGATT GTCAACAATC CGCGTTATAC GCCGCAGCAC
TGGCGCGAGG TGGCTGCGGC CATCGAGGAG ATGCTCGGTC GATTGAAGGT GTCGAAAACG
AGTGAATTCT CGAAACGGTA TTATCGTGAG CGACTGGTTC TCCGGCTGCG CGATGTCTAC
GTTCGAGCGG AGCAAACCGC TAAGGTTATC CCCCTGCTGG AGCGAGAGGC ACCCCATACC
CACTGTTATA AAGAACTGGT GAAAGCTTTG CGTAACGCCG GGGATTTTGA CCGGGCGCGA
GCATGGTGCA TCAAAGGTTT TCGGAAGACC ATTAAAAAGG CCCCCGGTAT CGCCGACGGT
TTGCAACGCC AGCTGCGAAA ACTCGCCACG GACGAAGGAC GTTTTGATCT GGTTGCCGCT
TACCGGTCCC AGGATTTTTT CAGACACCCT TCGGATGAGG CTTACCTTGC CTTGAAGGAA
GCGGCAGAGA AAATCGATGT CTGGCAAGCG GTTCGTTGTG CTGTGCTCGA TTATCTTCGG
ACGGGAAATC TGCCCGTCAA AGACGGATTT CATCTCTCGT GGCCTTTGCC GGTGCCGGAG
ATCGAATTCG AACAGGCCCA AACTCCTTCA CGACGTTTGA ATTTCCCGAA TTGGGAGCTT
TTGATCGAGA TCGCCATTCT GGAAAAACGC CTCGATGATG CGGTAGCAAT CTACCAGGAG
CGACCTGCCG CCAGACATTG GGGCTACAGT GTCGATGAGG CGTTGGCCAA GGCGGTTGCC
GCCAGTCATC CCGATATCGC GTTGCGGATT TGGCACACGA TCGCCGAAAG CCTGATCGGG
CAGGTTAAAC CGAAGGCCTA TAAGGAAGCA GCCAAATACC TGCGCAAAAT GCACCAAGTT
TTTCAACAGA CCGCCCGACA AGGCGATTGG ACAGCGCTGA TCCAGGATCT GCGTATCCGT
CATAAAGCCA AGCGCCGCTT GATGCAGGTG TTGGATGAGT TGACGAAAAA CCGTAAGCTG
GTGTGA
|
|---|
| Protein sequence | MQSIREKFKD LTHEDLRDWA GDRIYQRGKD YTSCVSQLSR TEDGTLVAWV SGNDEYATWV
RHEGQADFDY NCTCPYDYGP CKHAVAVLLA AASRIRQRKE IPLLAPDDEL YLEAFETAQD
DWDDEDDTAP SFVPPAPGTI KSAQNLEKLL AEKSRDQLQR LLVNLAGEFP DVARRIREKG
QLESGKVDQL VRSLRKEIRK LTAQEAWYSH WEHRGNLPDY SHLEKQLLAL LNNGNADAVM
ELGEELWTRG IEQVEQSDDE GMTAEAISAC LAIVLKALPQ TSLSPAEQLL WLAKHELDDQ
YGLLGDIDSI VNNPRYTPQH WREVAAAIEE MLGRLKVSKT SEFSKRYYRE RLVLRLRDVY
VRAEQTAKVI PLLEREAPHT HCYKELVKAL RNAGDFDRAR AWCIKGFRKT IKKAPGIADG
LQRQLRKLAT DEGRFDLVAA YRSQDFFRHP SDEAYLALKE AAEKIDVWQA VRCAVLDYLR
TGNLPVKDGF HLSWPLPVPE IEFEQAQTPS RRLNFPNWEL LIEIAILEKR LDDAVAIYQE
RPAARHWGYS VDEALAKAVA ASHPDIALRI WHTIAESLIG QVKPKAYKEA AKYLRKMHQV
FQQTARQGDW TALIQDLRIR HKAKRRLMQV LDELTKNRKL V
|
|---|
| |