Gene Pcar_0708 details

Gene Information

• Locus tag: Pcar_0708
• Symbol: rplP
• ID: 3723297
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 857018
• End bp: 857443
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637750299
• Product: 50S ribosomal protein L16
• Protein accession: YP_356137
• Protein GI: 77918322
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0000000000940858
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATGC CCAAGAAGGT TAAACATAGG AAACAGTTTA AGGGCCGCAT GAAGGGCGTT 
GCCTATCGCG GTAGTGATCT CAATTTCGGG GATTACGGGC TTAAAGCGGT TGAGTGCGGG 
TGGCTTTCCT CCCGTCAGAT CGAATCGGCA CGTCGTGCCA TGACCAGACA CGTCAAGCGT 
GGTGGTAAAA TTTGGATTCG TATCTTCCCC GATAAGTCTC TGACTAAAAA GCCCGCTGAA 
ACTCGTATGG GTAAGGGCAA GGGGTCGCCT GACAGCTGGG TCGCCGTCAT CAAGCCCGGC 
ATGATGTTGT ATGAGATGCA GGGTGTGGAT AAGGAAGTGG CCTGCGAAGC ATTGCGGCTG 
GCTGCTCATA AGCTCCCCAT GAAGACCAAG ATTGTTGTCA GGGAGGATGT GGCCAATGAA 
AGCTAG 

 

Protein sequence

MLMPKKVKHR KQFKGRMKGV AYRGSDLNFG DYGLKAVECG WLSSRQIESA RRAMTRHVKR 
GGKIWIRIFP DKSLTKKPAE TRMGKGKGSP DSWVAVIKPG MMLYEMQGVD KEVACEALRL 
AAHKLPMKTK IVVREDVANE S