| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0667 |
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| Symbol | |
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| ID | 3724007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 807391 |
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| End bp | 808827 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637750253 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_356096 |
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| Protein GI | 77918281 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 92 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGTT TTTGGGGTAT TGCCTTTCTG TTGGTGTTGG TCGGGTGTTC CGTACATCGT
CCCGTTCCTG TGGAACTTCC GGTGCCGGTT CCGGATCGTT ATCTCGAATC AACGGCCGCA
CCTGGCGAAC CGGTTGCGCA ACCCTGGTGG CATATTTTCG AGGATCCCGC CCTTGATCGC
CTGATGCTGC AGGCTTTCGG CGCCAATCTT GAGCTGGATC AGGTTCTTGC CCGTTGGCAG
CAGGCCGAGG CGGCGGTGCG GTCGGTCGAG TCGGCCCGCC GGCCGAGTTT AGGTTTGGAT
GGGCAGGCGG GGCGTCAGCG ACAGATGACC TTTTTGGGGC CCGTTACGGC AGATCATTAC
AGTTTGTCGG TGGTGGCGGG TTTTGAACTC GACGTGTGGC GTAAGCTGGC ATCCCGATCC
GAAGCGGCCA GGCGCGAACA AGCGGCGGCC GCAGCCGATG TGGAAGCGAT TTGTCTGTCT
TTGTCGGCGC GGTTGGCGGA TCTTTATTAC ACGGCAGTCG AGCAGCGCGC CCAGCACGCT
TTGCTCGAAA ACACCATTGT TTCCTACCTC GATATCCTTG AACGCGTGGA GCGGCGTTAT
CGCGCCGGTA TCGCGCCGGC CCTGGAGGTC TATCAGGCAC GCCAGAATCT GGCCGCAGCC
CGTGCGCGCC TGCCCCAGGT GGAGGCCCGA CTGGCCGCTG CCGAACATGG CTTGGCCGTG
TTGTTGGGGC GCTACCCCCA AGGTGGCCTT GCCGGGCAAC TGGCTGTTTT GCCCGCTCCG
GCAAAGAATT ATCCCCTGGG GGTGCCTTCG CAGTTGTTGA ACCGCAGACC CGATGTCAAA
GCCGCCTTGT TGCGGGTCAA GTCTGCCGAC AATCGGGTAG CGGAGGCTAT TGCCGAACGT
TTTCCCGCTT TCAACCTGGC GGGTGGCTAC GGTGGCGGTG CCGATACGCC GCGACAGGTA
TTCGCTTCGC CGAATATTTT CTGGAATCTG CTGGTCAATC TCACCCAACC TATCCTGGAC
GGCGGTCGTC GTCGTGCGGA AGTCGACCGC AGGCAGGCGC TGTTCAAGGA ATTGCTGGCC
AGCTATCAGA CACGTGTGCT CGAGGCCTTT CGCGAGGTCG AGGATGCGCT GGCCGCAGAA
CGCGCAAGCC GGGAACAGGT TGCCCAACTG CAGGCACGCA GAGCATCGAC CTCGGCCGCT
CTGCGTCTGG CGACAGACCG CTATACGTTG GGGGTTTCTG AGTATCTGCA GGTGCTTACG
GCCCAGGTTC TTCATCTGGA AACGGAAAGC GGCCTGCTTT CGGCCCGCCG TCAACAGGTC
GCCGATCGCA TTTCGCTTGC ACGTGCCCTT GGCGGTCACT GGATGCTGCA ACAGTGCCGG
CAATCCCGTA ACGATTCGGT AATTTTCCCG ACTGAGGATA GTGATCATGA CAAGTAA
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| Protein sequence | MRSFWGIAFL LVLVGCSVHR PVPVELPVPV PDRYLESTAA PGEPVAQPWW HIFEDPALDR
LMLQAFGANL ELDQVLARWQ QAEAAVRSVE SARRPSLGLD GQAGRQRQMT FLGPVTADHY
SLSVVAGFEL DVWRKLASRS EAARREQAAA AADVEAICLS LSARLADLYY TAVEQRAQHA
LLENTIVSYL DILERVERRY RAGIAPALEV YQARQNLAAA RARLPQVEAR LAAAEHGLAV
LLGRYPQGGL AGQLAVLPAP AKNYPLGVPS QLLNRRPDVK AALLRVKSAD NRVAEAIAER
FPAFNLAGGY GGGADTPRQV FASPNIFWNL LVNLTQPILD GGRRRAEVDR RQALFKELLA
SYQTRVLEAF REVEDALAAE RASREQVAQL QARRASTSAA LRLATDRYTL GVSEYLQVLT
AQVLHLETES GLLSARRQQV ADRISLARAL GGHWMLQQCR QSRNDSVIFP TEDSDHDK
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