| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0542 |
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| Symbol | |
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| ID | 3725871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 655765 |
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| End bp | 656757 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637750128 |
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| Product | integrase |
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| Protein accession | YP_355972 |
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| Protein GI | 77918157 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 64 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA AGTCAAAATT CAGACCAAAT CCTGAGCTAA AACTCATGGA TCAAGTTCGC
GAGGTCTTGC GTTACCATCA TTATGCCTAC CGAACCGAGC AAACCTATTG CGACTGGATT
GTGCGCTATA TCCGGTTCTT TGGGGCGAAA TACCACCCCT GCGATATGGG CAAAAAAGAG
ATCGAGGCTT TTTTGAGCCA CCTGGCAACG GATTGCAAAG TCTCGGCAAA CACTCAACGT
CAAGCACTGA ACGCTATCGT GTTTTTATAC AGACAAGTTC TTGACCAACC GGTGGATGAG
CTCATCGAGC ATATAAAAGC CAGAAAAAAC CGACGTCCAC AGGTTGTGCT AAGCCAAAGC
GAAGTTCAAC AGGTGCTGGC CCGGATGACA GGGACGCATC TGTTAATGGC TCAGCTTCTG
TACGGTGGCG GTCTGCGATG GATGGAATGT ATCCGATTAC GCGTGCAGGA TCTTGATTTC
GAAAGGGATT TGATCTACGT GAGGGATGGT AAAGGCGGGA AAGATCGAAC CACGACCTTT
CCAGCTTCGA TAAAGAATGG CTTACAGACG CATGTCGACA GAATTGGGCA ACTCCACGAA
CAGGATCTGG CCAAAGGATA CGGAAGCGTC TATCTGCCCA ATGCACTTGA CATAAAATAC
CCAAATGCGG AAAAAGAATT CGCCTGGCAG TATGTTTTCC CAAGCAAACG CCTGAGCACA
GATCCACGTT CCGGCAAGAT TCGCCGCCAT CATGTCCTTG AGTCCGGCTT GCAAAAGGCG
GTAAAGGTTG CGGTAAACCG TGCCGGAATC CATAAAAGAG TCGGCTGTCA TACCTTTCGC
CATTCGTTCG CGACCCACTT GCTGGAAAAC GGTGTGAATA TCCGCGTGGT GCAGGAACTG
ATGGGGCATG CCGACGTCAA AACCACCGAG ATTTACACCC ATGTCATGGC CAAAAATATT
GATGCTGTGA CCAGCCCGCT CGATGTGCTA TAG
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| Protein sequence | MKNKSKFRPN PELKLMDQVR EVLRYHHYAY RTEQTYCDWI VRYIRFFGAK YHPCDMGKKE
IEAFLSHLAT DCKVSANTQR QALNAIVFLY RQVLDQPVDE LIEHIKARKN RRPQVVLSQS
EVQQVLARMT GTHLLMAQLL YGGGLRWMEC IRLRVQDLDF ERDLIYVRDG KGGKDRTTTF
PASIKNGLQT HVDRIGQLHE QDLAKGYGSV YLPNALDIKY PNAEKEFAWQ YVFPSKRLST
DPRSGKIRRH HVLESGLQKA VKVAVNRAGI HKRVGCHTFR HSFATHLLEN GVNIRVVQEL
MGHADVKTTE IYTHVMAKNI DAVTSPLDVL
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