Gene Pcar_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0349 
Symbol 
ID3723482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp436074 
End bp436988 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content55% 
IMG OID637749933 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_355779 
Protein GI77917964 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTGA AAGATATAAA TCAGGTGCTG GTTGTGGGCG GCGGCACCAT GGGGCGGCAG 
ATTGCATTTC AGTGTGCGGC TCACGGATAC TTTGTCACAA TCTATGATAT ATCCGCGGAG
GTCTTGCAGG CGACCCAGAA GCGGATTGGG GCCTACGCGG ATTATCTCGT GGCCGAAGGT
CATATACAAC CGCAGGCGGC GAAAAGGGCA ATCAACCGTA TTTCGATCAG TACCGATGCC
CGCCAGGCGG CCAATGCGGA CCTGCTCTGC GAAGCGGTGC CCGAGGATCC TGCCTTAAAG
GGTGAGGTGT TCGCCCGTTT CGATCGCTAT TGTCCGCAGC GCACCATTTT TTCCACCAAT
GCTTCGTTGC TCGTGCCTTC CCAGATTGCA AAGGCCACGG GTCGTCCTGA CCGTTTTCTG
GCGTTGCATT TTCACCAGCC GGTCTGGGTC GGAAACCTGG CGGATGTCAT GCCCCATGCG
GGCACCTCGT CGGAGGTAGT CAAGGTGGTG CACGATTTTG CCAAATCGAT CAACCAGATC
CCGCTGGTGT TGAACAAAGA AAATTTCGGC TATGTTTTCA ACGCCATGTA CAGTGGCTTG
AACAGTGCCG CCATTACCTT GGCCGCCAAC GGGGTTGCGG CCGTGCCGGA TATCGATCGG
GCATGGATGA CCGTGATGAA GATGCCCAAA GGGCCCTTGG GTATGCTTGA CGTGATGGGG
CTGGATACGG TGTGGCAGGT AACGGACTAC TGGGGCAAAA CGACTAGGGA CGCGCAAACC
ATTAAAAACG CCAGCTATCT CAAAGAGGAA TATCTTGAAA AGGGCTGGCT GGGCGTTAAG
ACCGGGCGTG GGTTTTATTC CTACCCGCAT CCCGCATATC AGGATCCGAA GTTTATTCAT
GGAGGCAGAA TATAG
 
Protein sequence
MELKDINQVL VVGGGTMGRQ IAFQCAAHGY FVTIYDISAE VLQATQKRIG AYADYLVAEG 
HIQPQAAKRA INRISISTDA RQAANADLLC EAVPEDPALK GEVFARFDRY CPQRTIFSTN
ASLLVPSQIA KATGRPDRFL ALHFHQPVWV GNLADVMPHA GTSSEVVKVV HDFAKSINQI
PLVLNKENFG YVFNAMYSGL NSAAITLAAN GVAAVPDIDR AWMTVMKMPK GPLGMLDVMG
LDTVWQVTDY WGKTTRDAQT IKNASYLKEE YLEKGWLGVK TGRGFYSYPH PAYQDPKFIH
GGRI