Gene Pcar_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0259 
Symbol 
ID3722790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp324128 
End bp325669 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content56% 
IMG OID637749840 
Producttwo component signal transduction response regulator 
Protein accessionYP_355690 
Protein GI77917875 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGAAGG TAAACATCCT GATCATCGAT GACGAGGAAT CTGTCTGTAC ATTTTTCCGG 
CGGTTGCTGC AAAGGAAAGG GTACCGGACC GTTACCGCCG TCAATGAAGA GGAGGCCTTA
AAAGCGCTCG ACTACGGCAC GTTCAATGTG GCGATGGTCG ATCTCAAGTT GCCCGACACC
GATGGCTTAA CCCTGTTGAA GCACATCAAG AGCCGTCAAC CGGCCTGCGA AGTCATTATC
ATGACCGGTT TCAGTACCAT CAAGACGGCG GTGCAGGCCA TGCAGCTGGG AGCATACGAA
TACCTCGAAA AACCCTTTGA GGATATCAAG CTTATTGAAC GGCTTATCGA AAAAGCTTCT
GCCGTGAGTT TTCAGGGAGG CAAGGAAGAA GACGAAGAGT GGAGCGAACT GGCCAAATCC
ATGGGTTTTC TGGTCGGCGA CAGTCCGGAT ATGCGTCGCC TGGTTTCTCT GGCCTACAAA
ATCGCTCCCA AAGATATCAG CGTCCTTATC CAGGGTGAAA CCGGCACCGG CAAGGAAGTG
CTGGCGCGCT TTATCCATAC CGCCTCGGCC CGCACGGAGC AGATGTTCAT CCCCATAAAC
TGCGGTGCCC TGTCCGATAA CCTGCTCGAA AGCGAATTGT TCGGTCACGA GCGCGGTTCC
TTTACCGGAG CGGGCAACAT GCGCCGGGGT ATTTTTGAAA TGGCCAACAA GGGTTCCCTG
TTCCTGGATG AGATCGGTGA GGCCAGCCTG GCCATTCAGG TTAAATTGTT GCGCGTACTG
GAAACCGGGG AGTTCATGCG CCTCGGCGGA GAGAAACAGA TTCATTGCGA CGTGCGTGTC
ATCTCCGCCT CCAACGTCGA TCTGGAAGAT GCCATGTTGC GGCGGGAATT CCGCGAAGAC
CTCTTTTATC GGCTGAATGT CGTCAAACTG GTCATTCCGC CGCTGCGCTC GCGGGCACAG
GACATTCCGA TGCTGGCCAA GTATTTTGTC AAACAGTTCA ATCCGACCCT GACGCTGTCG
GACGAAATCC TCGATCTGCT GTGCCAGTAC GACTGGCCGG GCAATATCCG GGAATTGTCC
AATACCCTGC GGCAGGCGGT GGCCCTGTGC GACGACAAGG TTATCCTGCC GGAACATTTC
TCCGGTAAAT TGACCGCCAG CAAACCCCGC CCGATCAGCA ACGGACAGGC CGCCGTGGCT
TCGCCGGCGT TCGCCGAAGC AGAGCCTGCC AGCTCTGCGC CGTCCCTGGA AAGTTTCTGG
GAGCATTACG GTACCCCGGA AGCCCTGTCG CAGCTTTCCG ACGGCGAACT GACTCAGCTG
TTGAATTCCC TGCGCGGTCT GGAAGCGAAC CTCTATGCGG TGATGCGCAA AAAAGGGCTG
TCCTCGGCCG GTAGCGAAGC GTTGCGGGAT TCGGAGGCCG CCTCCATCAA GCGTACCCTG
TTGCAGCATC GTTGGAACAT TACCGAGGCG GCGCGCGCCT TGGGGATTGC CCGCAACACT
CTGCATCGCA AAATCAAGAA ATACGGTCTG CAGAATCAAT AA
 
Protein sequence
MSKVNILIID DEESVCTFFR RLLQRKGYRT VTAVNEEEAL KALDYGTFNV AMVDLKLPDT 
DGLTLLKHIK SRQPACEVII MTGFSTIKTA VQAMQLGAYE YLEKPFEDIK LIERLIEKAS
AVSFQGGKEE DEEWSELAKS MGFLVGDSPD MRRLVSLAYK IAPKDISVLI QGETGTGKEV
LARFIHTASA RTEQMFIPIN CGALSDNLLE SELFGHERGS FTGAGNMRRG IFEMANKGSL
FLDEIGEASL AIQVKLLRVL ETGEFMRLGG EKQIHCDVRV ISASNVDLED AMLRREFRED
LFYRLNVVKL VIPPLRSRAQ DIPMLAKYFV KQFNPTLTLS DEILDLLCQY DWPGNIRELS
NTLRQAVALC DDKVILPEHF SGKLTASKPR PISNGQAAVA SPAFAEAEPA SSAPSLESFW
EHYGTPEALS QLSDGELTQL LNSLRGLEAN LYAVMRKKGL SSAGSEALRD SEAASIKRTL
LQHRWNITEA ARALGIARNT LHRKIKKYGL QNQ