Gene Pcar_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0189 
Symbol 
ID3723002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp240609 
End bp242351 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content63% 
IMG OID637749766 
Productacetolactate synthase large subunit 
Protein accessionYP_355620 
Protein GI77917805 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTCA GTGATCTTAT TGTCCAATAT CTCGAAAGCT TCGGCGTGGA ATATGTCTTC 
GGTATTCCCG GCAGTCCCCT CGGCCCGCTG TTCGATGCCC TCAAACGCAG CGAAAAGCGT
GGCGGCCCGC GCCTGGTTCT GACCCGCCAT GAAGCCGGTG CGGCCTTTAT CGCCGACGGA
TACGCCCGTG AAAGCGGTAA GCTCGGCGTC TGCTGTTCCA CCACCGGTCC CGGTGCCACC
AACCTCATTA CCGGGGTGGC CTCGGCCTAT GCCGAGCAGG TGCCGATGCT GGTTATTACC
CCCCAGACCC GCCTGGGCGC ACTGGGCTTC GGCTGCTTTC AGGACTCGTC GCGCAACGGT
ATCGACGTGG TGAGCATGTT CGAAACCTGT ACCGTCTATA ACGCCTCGGT GACCCATCCC
GATCAGTTGG AGAAGAAGCT GGTGGCGGCT CTGACCGCCG CATTCAGCGT TCCCCGCGGC
CCGGCGCATC TGAGCATCCC CATCGATGTG TTTGTGGCGG AGACCGATGC GCCGCTGCAG
TTTCCCCATT TGCACCAACT GCTGGCCAAC CGCACGGCAC CGCTCGATAC CACCGGCCTC
GACCAGCTCT GCGAAGAAAT CTTTGGTGTG ATGAAGGGCG GCGGCAGGCT TTGCCTGCTG
GCAGGGCACC ATGCTATCGG TGCAGGCCGA GAGCTGGAAA AATTCGCCGA TCTGACCGGC
GCCTCCCTGA TCACAACCCC GCGCGGCAAA GCGGCCATCG ACCCTCACCA TGCTCTGGCG
CGGGGCGTGT TCGGCATGGC CGGGCACCGT TCGGCCCGTG CGGCGCTGGC GGATGAGCAG
GTCGAACTGA TCCTGGCCGC CGGCACCAAT CTCGGCGAAT GGTCGACAGG CAAGTGGGAT
CCGGTGCTGA TGAACCATAA ACTGGTGCAT ATCCACAACG ACCGGCGCTG GTTCGGCCGT
TCGCCCATGG CAAGGCTGCA GGTGGAAGGG GATATGGCAA CCCTGTTCCG TCAACTCAAC
GCCCGGCTCG AAACCGAGCA GCGCGAGGGC CGGCTGTCTA CGCCAGCCAC CGCAGCGCAG
ACCGCAGCGC AGACCGCAGC GCAGACCGCA GCGGCGCCGT CCGGCTATAT CCCCGCGGGC
ATAAGTGTCA TCAAACCGGC CTGCTGCGAT ACGACCCGCA GCGATGCGCC CATCAAGGCG
CCCCAGGTCT ATGCCGAGCT GGTTCAGCGC CTGCCGCTGG AAACCCGCTA CTTCATCGAC
AACAGCAACA GTGTTCCATG GTCCATCCAC TATCTGTTCC ATCCCCGGCC GGAGAATTAC
CACCTGTCCA TCGAATTCGC CACCATGGCG TGGGCGGTGG GGGCGGCGGT CGGCGCCGCT
TTCGGCAACC CCCAGGCGCC GTCGGTGTGC CTGGCCGGTG ACGGCTGCTA TCTGATGAGC
GGCCAGGAGA TCACCGTCGC GGTGGAGAGG CAGCTGCCGG TTATTTTCGT GGTGCTCAAC
GATCGCGGTT ACGGTCTCAT CAAGCACGGC CATCGGATCG GCGGCAAGGA AGATGTCGAT
TACTCCATAC CGTCGGTGGA TTTCGCCATG ATGGGGCGTG CCGCCGGTGC CGAAGCCCAG
ACGATTCGCA GCATGAGGGA TTTCGACCAT CTGGATTGGC AGGCTCTGGC CACGCGGCAG
GGGCCGACCT TGCTGGAGGT CATCATCGAT CCGGAAGAAC AGCCGCCTAT CGCTATGGCC
TGA
 
Protein sequence
MNLSDLIVQY LESFGVEYVF GIPGSPLGPL FDALKRSEKR GGPRLVLTRH EAGAAFIADG 
YARESGKLGV CCSTTGPGAT NLITGVASAY AEQVPMLVIT PQTRLGALGF GCFQDSSRNG
IDVVSMFETC TVYNASVTHP DQLEKKLVAA LTAAFSVPRG PAHLSIPIDV FVAETDAPLQ
FPHLHQLLAN RTAPLDTTGL DQLCEEIFGV MKGGGRLCLL AGHHAIGAGR ELEKFADLTG
ASLITTPRGK AAIDPHHALA RGVFGMAGHR SARAALADEQ VELILAAGTN LGEWSTGKWD
PVLMNHKLVH IHNDRRWFGR SPMARLQVEG DMATLFRQLN ARLETEQREG RLSTPATAAQ
TAAQTAAQTA AAPSGYIPAG ISVIKPACCD TTRSDAPIKA PQVYAELVQR LPLETRYFID
NSNSVPWSIH YLFHPRPENY HLSIEFATMA WAVGAAVGAA FGNPQAPSVC LAGDGCYLMS
GQEITVAVER QLPVIFVVLN DRGYGLIKHG HRIGGKEDVD YSIPSVDFAM MGRAAGAEAQ
TIRSMRDFDH LDWQALATRQ GPTLLEVIID PEEQPPIAMA