Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0118 |
Symbol | |
ID | 3722913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 142785 |
End bp | 143912 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637749696 |
Product | putative nuclease |
Protein accession | YP_355550 |
Protein GI | 77917735 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCC TGAACCTGAA AAATATTTTT GCATTTTTCG TTATGTGCTG TTTGTTTTTT TGTAGCCATT CCTGTTGGTC GGATCAAATC GTTTTAAGTG ATCGCGTACA AACCGCTCTT AATGTCAGGG AAAGGCCAAC TACTGAAAGC GCTGTCGTGG GAAAGCTTTT ACGAAACCAG ACAGCGGAAT ATCTTGATTC GGTTCCCTAT TGGTATCATG TCAGGCTCGA GGATGGGGGT ACGGGATATG TTAGTAAGGC ATGGTCTGAA AAGCTTTCTT TGGAGCAAGA AAGTGGAAAA ATCGTGCGAG TTGGGAGTTG GAATATCAAG AAGTTGGGTC ACGGTAACCA AAAAGATTAT GCGACTGTTG CCAAAATTAT CGATGCGAAT TTTGATGTTA TGGCAGTTGT CGAAGTTATG CAAAAGGGAG GTGGGCACCC AGGCTATGAT AAATTAGTTT CGGTTCTAGG CCCCGAATGG AATGGCCTGG TTACTGGTGA GCCCCGACCC AATACTGGGT CTGGCAGCGC CGAATTTTAT GCCATCCTTT ATCGTCCAGC ATTGGTCAGA ACCTGTTCTG GATGGGGTAG CTTGGCATTT TTCCCGGACA ACGACGGAAG TGGCCAGGAC TTAGTTCCAG ATATTTTTTC CAGGGAACCG GCGTTCGGAT GTTTTGAAGT GCCAAATACT GACGGCACGG TTGGATTCGA TTTTTTGCTG GCCGGGTATC ACGCAAGATG GTCGCAAGGT GACAAAGAAC AGATCAAAAC GGAGGTAGCG AGGCTGAAGG AGGTTTTTCA GGCGATGAAG GAAAGCAGAC CGGAGGAGGC TGACCTGATC ATCGCCGGTG ATTTCAACCT CGTCCCGTCG GAGATCAAGG AAGCGTTGCA TTTCGTTCCG GATACTGTTG CCAGTGGGTC TACGCTGAAC AGCAGTGGGG CAATCACCCA GAACGTGTAC GACCATGTTC TTATCCACAG CATATTAGCA ACTCAGGAAA TGATTGGTCA TCCCACTGTC ATAGATGTCA TTTCTTCTGC CTCAGACGGG CACGAATTCT ACACCCAGGT TAGTGATCAT TTGCCTGTGA TGGCACGCTT CAAAACCTTC GGGCCAGACG ATGATTGA
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Protein sequence | MKILNLKNIF AFFVMCCLFF CSHSCWSDQI VLSDRVQTAL NVRERPTTES AVVGKLLRNQ TAEYLDSVPY WYHVRLEDGG TGYVSKAWSE KLSLEQESGK IVRVGSWNIK KLGHGNQKDY ATVAKIIDAN FDVMAVVEVM QKGGGHPGYD KLVSVLGPEW NGLVTGEPRP NTGSGSAEFY AILYRPALVR TCSGWGSLAF FPDNDGSGQD LVPDIFSREP AFGCFEVPNT DGTVGFDFLL AGYHARWSQG DKEQIKTEVA RLKEVFQAMK ESRPEEADLI IAGDFNLVPS EIKEALHFVP DTVASGSTLN SSGAITQNVY DHVLIHSILA TQEMIGHPTV IDVISSASDG HEFYTQVSDH LPVMARFKTF GPDDD
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