Gene Pcal_2068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2068 
Symbol 
ID4910243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1919877 
End bp1920254 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content51% 
IMG OID640125821 
Producthypothetical protein 
Protein accessionYP_001056949 
Protein GI126460671 
COG category[S] Function unknown 
COG ID[COG2411] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCAGAG AGGTGGACAT AGGGCCCTTC GTTAGATTCA AAGAGAAGTA TTTGGAGAGC 
GTACTAAGCG GGAGGAAGAG GGTCACTGTT AGATACGGCG TAGTGAAGCC GAGGCTCTCT
CTCATATACA TAGTCTGTTG CGACAAAATA TACGCCGAGG CCCTCATCAC AAGGGTGTAC
TACACCGAGC TGGGAAAACT CGGCGAAGAG GTAGTAGAGG CCGAGGGATT TACAAGCAGA
GAAGAGCTGA TAAACGAGCT ACGCGAGATA TACGGCGAGG TGGGTGACAG GGACGTCGTG
ACAGTGATCT ACTTCACAGT GGTGAGAAAA TACGACAAGC CCGTGCCGCT GAAGAGATTA
AATAAGGCCC ATTTTTAG
 
Protein sequence
MGREVDIGPF VRFKEKYLES VLSGRKRVTV RYGVVKPRLS LIYIVCCDKI YAEALITRVY 
YTELGKLGEE VVEAEGFTSR EELINELREI YGEVGDRDVV TVIYFTVVRK YDKPVPLKRL
NKAHF