Gene Pcal_2066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2066 
Symbol 
ID4909793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1918013 
End bp1918840 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content55% 
IMG OID640125819 
Producthypothetical protein 
Protein accessionYP_001056947 
Protein GI126460669 
COG category[R] General function prediction only 
COG ID[COG2521] Predicted archaeal methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGTAC CAGTGGTGTC TAGGTGGCAG ATAGAGGACT TGAAAAATAG GTCTCGGGAA 
GTGTCCTTCG ACTTAGAGCT TACCAAGAGC CGGGTTGAAT ATGTGGGCGG GTTTGCCAAG
TTTGAGTACC GGGGCGTCTG GTACGAGGTG GCGTTGGACG AGCTTCCAGA TGTGGACGAG
GAGAGCTGTG AAGTATATGC ATATGTGGAG GGGACGTGGC GCGAGTTGTC GATAGCTGAG
AGCCGGTTTT ATAAGCTGTG CGTGTTTAAG AGGGGCTGGG CCCCCACCTT GATGATAGAT
GGAATCACTA TGCACAGCGT CTTGGAGGAC CCCATGGTCA TAACCGCGCG GAAGATTAGG
AGAGTCGGCG GGCGCGTCTT TGAGTGTTGC ACCGGCCTCG GCTACACAGC AATTGAGGCC
TTGAGGAGGG GGGCTAGGCA GGTGGTCACC GTGGAGGTGG ACCCCAACGT GTTAACTCTG
GCCATGTACA ACCCCTTTAG CAGAGGACTC TGGTCTCCTG CGGTGGATAT AGTGGTGGAG
GACTGCTTGG TCTTCATCGC CGCTGTTAGA GACTCGTCGT TTGACTACGT AATACACGAC
CCCCCGAGAC TTAGCCATGC CACTCAGAAG CTGTACTCTG AGGGTCTTTA CAGAGAGTTT
TACAGAATTT TGAAAAGGGG CGGAGGGTTG TTTCACTATG TGAGTCAAAC CGGCGTGAAG
TACAGGGGGC TTAATCCACT GCGCGGCGTA GTGGAAAGGC TTAGCAAAGT GGGGTTCGTC
GTAGAGGGGG CGGAGAGCGG AATTGGGGTG TATGCGAAAA GGCGCTAG
 
Protein sequence
MEVPVVSRWQ IEDLKNRSRE VSFDLELTKS RVEYVGGFAK FEYRGVWYEV ALDELPDVDE 
ESCEVYAYVE GTWRELSIAE SRFYKLCVFK RGWAPTLMID GITMHSVLED PMVITARKIR
RVGGRVFECC TGLGYTAIEA LRRGARQVVT VEVDPNVLTL AMYNPFSRGL WSPAVDIVVE
DCLVFIAAVR DSSFDYVIHD PPRLSHATQK LYSEGLYREF YRILKRGGGL FHYVSQTGVK
YRGLNPLRGV VERLSKVGFV VEGAESGIGV YAKRR