Gene Pcal_2038 details

Gene Information

• Locus tag: Pcal_2038
• ID: 4909031
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 1892217
• End bp: 1892741
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640125791
• Product: hypothetical protein
• Protein accession: YP_001056919
• Protein GI: 126460641

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.000816247
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGGAGGAGG GGGGAGATGG GCTGGTGGTG GATTCGGACA ACCTCCTCCC TCACGACTTC 
CCCTTGCTCG ACGAGAAGCT GGATTTGCCC CTCTACCACC TCTCGGATGT CCCGTGGGAG 
CATCCCAGGG TTGTGAGGAG GGAGAACCGC GGCGGAGTAG AGGTGTACTA CTGGAGTGTG 
AAGAACTTGT GGGGGCGCGT AATGCACGTC TTCGCCGGGC CTAAACAGGG CATAAGGATT 
AAAAAGCCCG TGCTCAATGT CGGGGCCATC GACTACGTGC TCTCTGTGGT GGCAGATGAA 
ATTACGATCG GCATTGTCTA CGACAAGTCG GGCATATCCG AGGTGCCTTT CATAGTAGCC 
ACGAAGCACT TGGGCCACTC CAGCTACCCC CGCCTGGGAC ACCACAAGGC CATACGCAGG 
AAGATCTACG CCATGGCCCT CGCCAGGCTC TACTGGAAGA CGGGCTACGC GCTCCCAGCC 
CTCCGCTACG CCGCCACAGC TCTCATCTGG GGGCTATCCT TTTAA 

 

Protein sequence

MEEGGDGLVV DSDNLLPHDF PLLDEKLDLP LYHLSDVPWE HPRVVRRENR GGVEVYYWSV 
KNLWGRVMHV FAGPKQGIRI KKPVLNVGAI DYVLSVVADE ITIGIVYDKS GISEVPFIVA 
TKHLGHSSYP RLGHHKAIRR KIYAMALARL YWKTGYALPA LRYAATALIW GLSF